Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2014

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,400,261	-		Shewana3_2013	0.44	+2.5
2,400,267	-		Shewana3_2013	0.44	+0.7
2,400,269	+		Shewana3_2013	0.45	-1.2
2,400,279	+		Shewana3_2013	0.45	+1.5
2,400,480	+		Shewana3_2013	0.62	+0.9
2,400,579	+		Shewana3_2013	0.70	+1.5
2,400,588	-		Shewana3_2013	0.70	+2.5
2,400,810	+		Shewana3_2013	0.88	-0.8
2,400,818	-		Shewana3_2013	0.89	-2.2
2,400,857	-				-0.0
2,400,904	+				+0.9
2,401,176	+				+0.5
2,401,613	+		Shewana3_2014	0.39	+0.2
2,401,767	-		Shewana3_2014	0.56	+1.1
2,401,798	-		Shewana3_2014	0.59	+1.1
2,402,199	+				-0.7
2,402,308	+				-0.3
2,402,412	+				-1.2
2,402,425	-				+0.2
2,402,623	-		Shewana3_2015	0.14	-0.0
2,402,697	+		Shewana3_2015	0.16	-0.1