Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2005

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,388,775	+		Shewana3_2004	0.36	-2.0
2,388,822	-		Shewana3_2004	0.39	+2.1
2,389,197	-		Shewana3_2004	0.64	+0.5
2,389,199	+		Shewana3_2004	0.64	+0.9
2,389,372	+		Shewana3_2004	0.76	+0.8
2,389,406	+		Shewana3_2004	0.78	-0.5
2,389,420	-		Shewana3_2004	0.79	+2.5
2,389,615	+				-1.3
2,389,954	+		Shewana3_2005	0.11	-1.0
2,389,996	+		Shewana3_2005	0.13	-1.3
2,390,010	-		Shewana3_2005	0.14	+1.5
2,390,123	+		Shewana3_2005	0.19	+0.2
2,390,258	+		Shewana3_2005	0.26	+0.5
2,390,258	+		Shewana3_2005	0.26	-2.0
2,390,271	+		Shewana3_2005	0.27	-0.3
2,390,297	-		Shewana3_2005	0.28	+0.0
2,390,348	-		Shewana3_2005	0.31	+0.9
2,390,650	-		Shewana3_2005	0.47	+1.5
2,390,966	+		Shewana3_2005	0.63	-0.1
2,391,164	+		Shewana3_2005	0.73	-0.8
2,391,222	+		Shewana3_2005	0.76	-1.4
2,391,270	+		Shewana3_2005	0.78	+0.6
2,391,346	-		Shewana3_2005	0.82	+2.5
2,391,346	-		Shewana3_2005	0.82	+0.5
2,391,591	-				+3.1
2,391,742	+				+0.6
2,391,847	+				-0.5
2,391,931	-				+1.5
2,391,970	+				+1.5
2,392,186	-				+0.2
2,392,321	+				+1.5
2,392,334	-		Shewana3_2006	0.23	+1.8
2,392,615	-		Shewana3_2006	0.50	+2.5