Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2000

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,384,705	+		Shewana3_1999	0.89	-0.6
2,384,705	+		Shewana3_1999	0.89	+0.5
2,384,705	+		Shewana3_1999	0.89	+0.5
2,384,713	-		Shewana3_1999	0.89	+1.5
2,384,862	+				-0.7
2,385,045	+				+2.5
2,385,154	+		Shewana3_2000	0.27	+2.5
2,385,162	-		Shewana3_2000	0.28	-1.1
2,385,172	-		Shewana3_2000	0.30	+0.9
2,385,174	+		Shewana3_2000	0.31	+2.5
2,385,273	-		Shewana3_2000	0.49	+1.2
2,385,514	-				+0.4
2,385,583	+				+0.7
2,385,591	-				-0.3
2,385,625	-				+1.5
2,386,019	-		Shewana3_2001	0.29	+1.5
2,386,136	+		Shewana3_2001	0.55	+2.5
2,386,145	+		Shewana3_2001	0.57	+2.5
2,386,238	+		Shewana3_2001	0.79	-0.3
2,386,384	-				+1.5
2,386,511	-		Shewana3_2002	0.10	+0.5