Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1874

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,218,488	+		Shewana3_1873	0.32	+0.6
2,218,638	+		Shewana3_1873	0.50	+1.0
2,218,756	-		Shewana3_1873	0.64	-0.7
2,218,756	-		Shewana3_1873	0.64	-0.3
2,218,916	+		Shewana3_1873	0.82	-2.3
2,218,923	+		Shewana3_1873	0.83	+1.6
2,219,030	+				+1.6
2,219,120	-				-0.4
2,219,335	+		Shewana3_1874	0.12	+1.1
2,219,666	-		Shewana3_1874	0.49	+2.2
2,219,708	-		Shewana3_1874	0.54	+1.6
2,219,768	+		Shewana3_1874	0.61	-0.1
2,219,774	-		Shewana3_1874	0.62	+0.3
2,219,816	-		Shewana3_1874	0.67	-0.4
2,219,880	+		Shewana3_1874	0.74	+1.6
2,219,939	+		Shewana3_1874	0.81	-0.1
2,219,939	+		Shewana3_1874	0.81	-1.4
2,220,008	-		Shewana3_1874	0.88	+0.3
2,220,066	-				+2.6
2,220,223	-				+0.5
2,220,273	+				+1.0
2,220,295	+				+0.3
2,220,295	+				+1.0
2,220,356	+				+0.4
2,220,364	-		Shewana3_1875	0.10	+0.0
2,220,440	+		Shewana3_1875	0.13	+1.6
2,220,468	-		Shewana3_1875	0.14	+0.0
2,220,595	+		Shewana3_1875	0.19	+2.0
2,220,596	+		Shewana3_1875	0.19	-0.2
2,220,697	+		Shewana3_1875	0.23	-1.3
2,220,697	+		Shewana3_1875	0.23	+1.6
2,220,698	+		Shewana3_1875	0.23	+1.2
2,220,705	-		Shewana3_1875	0.24	+1.8
2,220,706	-		Shewana3_1875	0.24	+1.0
2,221,029	-		Shewana3_1875	0.37	+1.6
2,221,068	-		Shewana3_1875	0.38	+1.0