Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1846

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,186,516	+		Shewana3_1845	0.78	+1.0
2,186,618	-		Shewana3_1845	0.81	+1.5
2,186,738	-		Shewana3_1845	0.85	+1.0
2,186,788	-		Shewana3_1845	0.87	-0.0
2,186,939	+				+2.5
2,186,996	-				+1.5
2,187,242	-				-0.5
2,187,331	-				+0.2
2,187,376	+				-0.6
2,187,376	+				-0.9
2,187,384	-				+1.0
2,187,486	-				+1.3
2,187,521	-				-1.7
2,187,596	+		Shewana3_1846	0.10	+2.5
2,187,690	-		Shewana3_1846	0.18	-0.3
2,187,769	-		Shewana3_1846	0.25	+1.2
2,187,791	+		Shewana3_1846	0.27	+0.2
2,187,791	+		Shewana3_1846	0.27	-0.0
2,188,081	-		Shewana3_1846	0.51	+1.1
2,188,178	+		Shewana3_1846	0.59	+0.5
2,188,178	+		Shewana3_1846	0.59	+2.0
2,188,324	+		Shewana3_1846	0.72	+1.5
2,188,523	-		Shewana3_1846	0.88	+0.5
2,188,736	-				-0.6
2,188,903	+				+2.5
2,188,953	-				+0.8
2,189,292	+				-0.0
2,189,292	+				+1.0
2,189,332	-				-0.7
2,189,337	-				+1.6
2,189,337	-				+0.4
2,189,339	-				-0.6
2,189,575	+		Shewana3_1847	0.34	-1.2
2,189,640	+		Shewana3_1847	0.44	-0.6
2,189,642	+		Shewana3_1847	0.44	+0.7