Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1674

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,965,810	+				+0.6
1,965,810	+				+1.0
1,965,848	-				+0.1
1,965,896	+				-1.4
1,965,904	-				-1.3
1,965,904	-				+0.4
1,965,978	+				-0.3
1,966,062	-		Shewana3_1673	0.20	-0.7
1,966,125	-		Shewana3_1673	0.36	+0.3
1,966,125	-		Shewana3_1673	0.36	-1.1
1,966,219	-		Shewana3_1673	0.59	-0.6
1,966,219	-		Shewana3_1673	0.59	+0.1
1,966,219	-		Shewana3_1673	0.59	-0.5
1,966,241	-		Shewana3_1673	0.64	-0.7
1,966,539	-				-1.6
1,966,716	+				+0.6
1,966,724	-				+0.1
1,966,789	-				+0.9
1,966,803	-				+0.6
1,967,245	+		Shewana3_1674	0.35	+0.2
1,967,661	+		Shewana3_1674	0.60	-2.1
1,967,669	-		Shewana3_1674	0.60	+0.6
1,967,672	+		Shewana3_1674	0.60	+0.1
1,967,707	-		Shewana3_1674	0.62	-0.9
1,967,852	+		Shewana3_1674	0.71	-0.1
1,967,989	+		Shewana3_1674	0.79	-0.7
1,968,055	-		Shewana3_1674	0.83	+1.5
1,968,057	+		Shewana3_1674	0.83	+1.5
1,968,177	-				-0.3
1,968,202	+				-0.0
1,968,250	+				-0.4
1,968,263	+				+0.0
1,968,292	+				-0.6
1,968,824	+		Shewana3_1675	0.14	+0.7
1,968,881	+		Shewana3_1675	0.17	-0.5
1,968,891	+		Shewana3_1675	0.18	-0.8
1,968,930	+		Shewana3_1675	0.20	+0.7
1,968,938	-		Shewana3_1675	0.20	-0.3
1,968,952	-		Shewana3_1675	0.21	+0.9
1,969,070	+		Shewana3_1675	0.27	+1.1
1,969,070	+		Shewana3_1675	0.27	+0.9
1,969,117	+		Shewana3_1675	0.29	+0.8
1,969,139	+		Shewana3_1675	0.30	-0.2
1,969,141	+		Shewana3_1675	0.31	+0.0
1,969,262	+		Shewana3_1675	0.37	+1.2
1,969,281	+		Shewana3_1675	0.38	-0.1
1,969,316	-		Shewana3_1675	0.40	+0.4
1,969,321	+		Shewana3_1675	0.40	+0.5
1,969,321	+		Shewana3_1675	0.40	-0.2