Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1546
Experiment: Vanillin 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Vanillin 1 mM |
---|---|---|---|---|---|
remove | |||||
1,802,541 | + | Shewana3_1545 | 0.15 | -0.9 | |
1,802,826 | - | Shewana3_1545 | 0.46 | -0.4 | |
1,803,018 | + | Shewana3_1545 | 0.68 | -1.6 | |
1,803,026 | - | Shewana3_1545 | 0.68 | +0.2 | |
1,803,300 | + | -0.9 | |||
1,803,428 | + | +0.2 | |||
1,803,451 | - | +0.3 | |||
1,803,560 | - | Shewana3_1546 | 0.52 | +0.8 | |
1,803,891 | + | +0.6 | |||
1,803,899 | - | +0.2 | |||
1,803,940 | + | +0.6 | |||
1,804,311 | - | Shewana3_1548 | 0.22 | +1.1 | |
1,804,319 | + | Shewana3_1548 | 0.24 | +2.4 | |
1,804,495 | + | Shewana3_1548 | 0.64 | -0.8 |
Or see this region's nucleotide sequence