Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1411

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,631,299	-				+0.3
1,631,431	-				+2.3
1,631,476	+		Shewana3_1410	0.17	-0.4
1,631,634	-		Shewana3_1410	0.44	-1.0
1,632,017	+				-0.7
1,632,136	-				+2.3
1,632,136	-				+2.3
1,632,455	+				-1.0
1,632,457	-				-0.3
1,632,724	+		Shewana3_1411	0.16	-1.0
1,632,968	+		Shewana3_1411	0.24	+0.7
1,632,968	+		Shewana3_1411	0.24	-0.1
1,632,971	-		Shewana3_1411	0.24	+1.3
1,632,982	+		Shewana3_1411	0.24	-0.9
1,632,989	-		Shewana3_1411	0.24	-1.0
1,633,121	-		Shewana3_1411	0.29	+4.3
1,633,133	-		Shewana3_1411	0.29	-0.2
1,633,581	+		Shewana3_1411	0.43	+0.4
1,633,581	+		Shewana3_1411	0.43	+1.1
1,633,589	-		Shewana3_1411	0.44	+2.3
1,633,589	-		Shewana3_1411	0.44	+0.3
1,633,589	-		Shewana3_1411	0.44	-1.0
1,633,589	-		Shewana3_1411	0.44	+2.3
1,633,649	+		Shewana3_1411	0.46	-1.1
1,633,769	-		Shewana3_1411	0.50	+0.7
1,633,997	+		Shewana3_1411	0.57	+0.0
1,634,148	-		Shewana3_1411	0.62	+1.3
1,634,270	+		Shewana3_1411	0.66	+0.5
1,634,308	+		Shewana3_1411	0.67	+0.2
1,634,534	-		Shewana3_1411	0.75	+0.7
1,634,770	+		Shewana3_1411	0.82	+1.8
1,634,770	-		Shewana3_1411	0.82	+0.6
1,635,065	+				+0.7
1,635,119	+				-0.2
1,635,540	+				-0.3
1,635,548	-				+2.1
1,635,772	-		Shewana3_1412	0.24	+0.4
1,636,232	-		Shewana3_1412	0.57	+1.3