Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1406

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,622,448	+				+2.3
1,622,456	-				-0.9
1,622,529	+				-0.1
1,622,537	+				-0.0
1,622,554	+				+0.7
1,622,564	+				+0.2
1,622,572	-				+0.9
1,622,572	-				+0.9
1,622,595	+				-0.5
1,622,610	-				+0.4
1,622,616	-				-1.3
1,622,628	+				-0.3
1,622,725	+				+0.3
1,622,733	-				+0.7
1,622,747	+				-0.0
1,622,784	+		Shewana3_1405	0.12	-0.0
1,622,799	+		Shewana3_1405	0.14	-0.1
1,622,863	-		Shewana3_1405	0.22	+0.2
1,622,913	-		Shewana3_1405	0.29	-0.3
1,622,926	-		Shewana3_1405	0.31	+0.7
1,622,931	-		Shewana3_1405	0.31	-0.9
1,622,965	+		Shewana3_1405	0.36	+0.7
1,622,967	+		Shewana3_1405	0.36	+0.9
1,623,062	+		Shewana3_1405	0.49	+1.2
1,623,159	-		Shewana3_1405	0.62	+0.7
1,623,186	+		Shewana3_1405	0.65	-0.7
1,623,196	-		Shewana3_1405	0.67	-0.3
1,623,264	+		Shewana3_1405	0.76	+0.4
1,623,705	-				+2.3
1,623,800	+		Shewana3_1406	0.38	-0.0
1,623,850	+		Shewana3_1406	0.44	+0.6
1,623,857	+		Shewana3_1406	0.44	+0.5
1,623,897	+		Shewana3_1406	0.49	+0.4
1,624,006	+		Shewana3_1406	0.61	+0.4
1,624,107	+		Shewana3_1406	0.71	+0.4
1,624,225	+		Shewana3_1406	0.84	+1.2
1,624,332	+				-2.0
1,624,342	+				-0.3
1,624,412	+				-0.4
1,624,506	-				+0.1
1,624,593	+				+1.0
1,624,701	+				-0.2
1,624,880	+				+0.7
1,625,055	+		Shewana3_1407	0.20	+0.9
1,625,145	+		Shewana3_1407	0.26	+0.9
1,625,165	+		Shewana3_1407	0.27	+2.5
1,625,218	+		Shewana3_1407	0.30	-0.3
1,625,333	-		Shewana3_1407	0.38	+1.3