Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1372

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,583,530	-				+0.7
1,583,584	+				-0.5
1,583,594	+				-0.5
1,583,675	+				-0.7
1,583,680	+				-1.3
1,583,688	-				+0.3
1,583,714	+		Shewana3_1371	0.12	-3.4
1,583,714	+		Shewana3_1371	0.12	-1.3
1,584,066	+		Shewana3_1371	0.56	-3.5
1,584,066	+		Shewana3_1371	0.56	-1.9
1,584,122	+		Shewana3_1371	0.64	-3.8
1,584,192	+		Shewana3_1371	0.73	-4.1
1,584,285	+		Shewana3_1371	0.84	-1.2
1,584,287	+		Shewana3_1371	0.85	-1.3
1,584,392	+				+0.3
1,584,419	+				+0.4
1,584,738	-		Shewana3_1372	0.19	+0.3
1,584,974	-		Shewana3_1372	0.40	+0.2
1,585,058	+		Shewana3_1372	0.48	+0.8
1,585,106	-		Shewana3_1372	0.52	+1.3
1,585,113	+		Shewana3_1372	0.53	-0.1
1,585,117	+		Shewana3_1372	0.53	+1.1
1,585,141	+		Shewana3_1372	0.55	-0.2
1,585,156	-		Shewana3_1372	0.57	+1.3
1,585,227	-		Shewana3_1372	0.63	+1.3
1,585,365	-		Shewana3_1372	0.76	+0.7
1,585,516	+		Shewana3_1372	0.89	-0.0
1,585,634	-				+1.3
1,585,634	-				-0.3
1,585,945	+				-0.3
1,585,945	+				+0.7
1,585,953	-				+0.2
1,586,168	+		Shewana3_1373	0.23	+2.3
1,586,218	-		Shewana3_1373	0.27	-0.2
1,586,346	+				+2.3
1,586,427	-		Shewana3_1373	0.41	-0.7
1,586,501	-		Shewana3_1373	0.46	-0.3
1,586,570	-		Shewana3_1373	0.51	+3.3