Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1224

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,425,456	+		Shewana3_1223	0.18	-1.5
1,425,456	+		Shewana3_1223	0.18	-0.6
1,425,456	+		Shewana3_1223	0.18	+0.4
1,425,456	+		Shewana3_1223	0.18	+0.1
1,425,456	+		Shewana3_1223	0.18	-0.7
1,425,464	-		Shewana3_1223	0.19	+0.5
1,425,526	+		Shewana3_1223	0.26	-0.1
1,425,590	+		Shewana3_1223	0.32	+2.2
1,425,634	+		Shewana3_1223	0.37	-0.4
1,425,661	-		Shewana3_1223	0.40	+2.3
1,425,749	-		Shewana3_1223	0.49	+0.7
1,425,768	+		Shewana3_1223	0.51	-0.6
1,425,983	-		Shewana3_1223	0.73	+2.3
1,426,178	-				-1.1
1,426,232	+				-1.3
1,426,348	-				-0.5
1,426,396	-				-0.1
1,426,642	+		Shewana3_1224	0.16	+0.4
1,426,722	+		Shewana3_1224	0.20	+0.3
1,426,875	-		Shewana3_1224	0.29	-0.9
1,426,889	-		Shewana3_1224	0.30	-0.5
1,426,988	-		Shewana3_1224	0.36	+0.3
1,427,024	+		Shewana3_1224	0.38	-1.1
1,427,232	-		Shewana3_1224	0.50	-1.1
1,427,344	-		Shewana3_1224	0.56	-0.3
1,427,351	+		Shewana3_1224	0.56	+0.8
1,427,392	-		Shewana3_1224	0.59	-0.4
1,427,398	+		Shewana3_1224	0.59	-0.4
1,427,398	+		Shewana3_1224	0.59	+0.3
1,427,586	-		Shewana3_1224	0.70	+0.4
1,427,682	+		Shewana3_1224	0.75	+1.2
1,427,690	-		Shewana3_1224	0.76	+1.2
1,428,083	-				-0.8
1,428,083	-				-0.7
1,428,119	-				+0.5
1,428,367	-		Shewana3_1225	0.14	+0.6
1,428,805	+		Shewana3_1225	0.54	-0.1
1,428,845	-		Shewana3_1225	0.58	+0.5
1,428,944	+		Shewana3_1225	0.67	+1.0
1,428,952	-		Shewana3_1225	0.68	-0.1
1,429,108	-		Shewana3_1225	0.82	-0.1