Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1219

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,421,825	+				-0.3
1,421,825	+				-0.5
1,421,837	+				-1.0
1,421,837	+				-0.6
1,421,845	-				+2.7
1,422,104	+		Shewana3_1217	0.41	-0.2
1,422,188	-		Shewana3_1217	0.81	-1.3
1,422,201	-		Shewana3_1217	0.87	+0.2
1,422,226	-				+0.8
1,422,472	+		Shewana3_1218	0.39	+0.4
1,422,887	-		Shewana3_1219	0.12	+0.7
1,422,956	+		Shewana3_1219	0.25	-0.1
1,422,964	-		Shewana3_1219	0.27	+0.4
1,422,964	-		Shewana3_1219	0.27	+0.6
1,423,111	+		Shewana3_1219	0.55	+0.3
1,423,158	-		Shewana3_1219	0.64	+0.5
1,423,270	-		Shewana3_1219	0.85	+0.3
1,423,471	+		Shewana3_1220	0.11	-0.8
1,423,473	+		Shewana3_1220	0.12	-0.2
1,423,630	+		Shewana3_1220	0.41	-0.1
1,423,645	-		Shewana3_1220	0.44	-1.5
1,423,709	-		Shewana3_1220	0.56	-0.8
1,423,741	-		Shewana3_1220	0.62	+2.3
1,423,763	-		Shewana3_1220	0.66	-1.0
1,423,896	+				-0.9
1,423,923	+				-0.4
1,423,961	+				+0.9
1,424,022	+				-0.1
1,424,116	+		Shewana3_1221	0.12	+0.0
1,424,200	-		Shewana3_1221	0.24	-0.3