Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1208

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,411,101	-				+0.3
1,411,257	-		Shewana3_1207	0.14	+0.1
1,411,281	-		Shewana3_1207	0.18	-0.1
1,411,442	+		Shewana3_1207	0.46	+0.7
1,411,450	-		Shewana3_1207	0.48	+0.5
1,411,539	+		Shewana3_1207	0.63	+0.7
1,411,567	-		Shewana3_1207	0.68	+0.7
1,411,620	-		Shewana3_1207	0.77	+0.1
1,411,688	+		Shewana3_1207	0.89	+1.7
1,411,728	-				+0.3
1,411,830	-				-0.3
1,411,830	-				+0.2
1,411,915	+				-0.8
1,411,996	-				-0.4
1,412,067	-				-2.1
1,412,077	-				-0.1
1,412,144	+				+0.3
1,412,157	+		Shewana3_1208	0.10	-0.4
1,412,173	-		Shewana3_1208	0.12	+0.3
1,412,211	+		Shewana3_1208	0.16	+0.8
1,412,280	-		Shewana3_1208	0.22	+1.5
1,412,552	+		Shewana3_1208	0.49	+0.1
1,412,552	+		Shewana3_1208	0.49	-0.7
1,412,560	-		Shewana3_1208	0.50	+1.6
1,412,593	-		Shewana3_1208	0.53	-0.4
1,412,670	+		Shewana3_1208	0.61	+0.1
1,412,785	-		Shewana3_1208	0.72	-0.5
1,412,878	+		Shewana3_1208	0.81	+0.3
1,413,068	-				-0.4
1,413,078	-				-0.6
1,413,078	-				-0.3
1,413,237	-				-0.4
1,413,316	-				-0.6
1,413,316	-				-1.3
1,413,344	+				+0.2
1,413,418	-		Shewana3_1209	0.13	-0.5
1,413,420	+		Shewana3_1209	0.13	+0.9
1,413,494	-		Shewana3_1209	0.18	+0.1
1,413,841	+		Shewana3_1209	0.42	-1.2
1,413,849	-		Shewana3_1209	0.42	+0.7
1,413,849	-		Shewana3_1209	0.42	-0.7
1,413,861	+		Shewana3_1209	0.43	+0.3
1,414,060	+		Shewana3_1209	0.57	-0.1
1,414,060	+		Shewana3_1209	0.57	-2.1
1,414,060	+		Shewana3_1209	0.57	-1.4