Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1126

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,325,700	-		Shewana3_1125	0.88	+0.7
1,325,775	+				+1.3
1,325,775	+				+0.3
1,325,783	-				+0.1
1,325,872	+				-0.5
1,325,892	-				-0.5
1,325,894	+				-1.0
1,325,902	-				+0.7
1,325,902	-				+1.4
1,326,052	+				-0.3
1,326,154	+				-0.6
1,326,261	+				-0.7
1,326,263	+				-2.6
1,326,269	-				-2.2
1,326,294	-				+0.2
1,326,377	+				-2.4
1,326,377	+				-5.3
1,326,385	-				-0.5
1,326,385	-				-0.0
1,326,476	+				-2.6
1,326,588	+	recA	Shewana3_1126	0.18	-1.7
1,326,626	+	recA	Shewana3_1126	0.21	-4.0
1,326,634	-	recA	Shewana3_1126	0.22	-0.0
1,326,942	+	recA	Shewana3_1126	0.51	-2.4
1,327,047	+	recA	Shewana3_1126	0.61	-4.8
1,327,047	+	recA	Shewana3_1126	0.61	-5.8
1,327,146	-	recA	Shewana3_1126	0.70	+0.7
1,327,294	+	recA	Shewana3_1126	0.84	-3.7
1,327,294	+	recA	Shewana3_1126	0.84	-5.3
1,327,302	-	recA	Shewana3_1126	0.84	+1.3
1,327,302	-	recA	Shewana3_1126	0.84	+2.3
1,327,366	-				-0.7
1,327,401	+				-0.0
1,327,464	+				-0.0
1,327,964	-				+1.3
1,327,976	+				+0.1
1,327,981	+				-0.5
1,328,124	+				+0.2
1,328,124	+				-0.3
1,328,124	+				+0.1
1,328,132	-				+1.6
1,328,132	-				+0.9