Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1063

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,248,155	+		Shewana3_1062	0.78	-0.3
1,248,250	-		Shewana3_1062	0.85	+0.0
1,248,288	-		Shewana3_1062	0.88	+0.2
1,248,312	-		Shewana3_1062	0.90	+0.3
1,248,373	-				+0.0
1,248,422	+				-1.6
1,248,453	+				+0.2
1,248,460	+				-0.7
1,248,468	-				+1.1
1,249,105	-				+0.7
1,249,122	+				-0.1
1,249,251	-		Shewana3_1063	0.13	+1.3
1,249,580	+		Shewana3_1063	0.59	-0.2
1,249,600	-		Shewana3_1063	0.62	+0.9
1,249,703	+		Shewana3_1063	0.76	+0.4
1,249,703	+		Shewana3_1063	0.76	+0.9
1,249,880	-				-0.3
1,250,032	+		Shewana3_1064	0.14	-0.2
1,250,250	+		Shewana3_1064	0.37	+0.3
1,250,258	-		Shewana3_1064	0.38	+0.3
1,250,348	+		Shewana3_1064	0.48	+0.2
1,250,356	-		Shewana3_1064	0.49	-0.3
1,250,356	-		Shewana3_1064	0.49	+2.1
1,250,356	-		Shewana3_1064	0.49	+0.0
1,250,358	+		Shewana3_1064	0.49	+1.9
1,250,358	+		Shewana3_1064	0.49	-0.3
1,250,358	+		Shewana3_1064	0.49	-1.2
1,250,358	+		Shewana3_1064	0.49	-0.8
1,250,366	-		Shewana3_1064	0.50	-1.3
1,250,366	-		Shewana3_1064	0.50	-0.1
1,250,833	+				+0.5