Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1054

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,234,565	-		Shewana3_1053	0.77	-2.0
1,234,670	+		Shewana3_1053	0.81	-0.7
1,234,725	-		Shewana3_1053	0.82	+1.3
1,234,773	+		Shewana3_1053	0.84	+0.8
1,234,831	+		Shewana3_1053	0.86	-0.9
1,234,963	-				+0.4
1,234,986	-				+1.7
1,235,034	+				-0.5
1,235,073	-				-0.9
1,235,313	+				-1.0
1,235,443	-				+0.3
1,235,475	-				+0.2
1,235,557	+	torD	Shewana3_1054	0.11	+0.4
1,235,669	-	torD	Shewana3_1054	0.29	+0.0
1,235,729	-	torD	Shewana3_1054	0.39	+1.2
1,235,958	+	torD	Shewana3_1054	0.75	+1.6
1,236,139	+				-2.6
1,236,150	+				-1.2
1,236,213	+				+0.4
1,236,263	+				-0.6
1,236,271	-				+2.3
1,236,271	-				+0.8
1,236,271	-				-0.1
1,236,319	-				-0.3
1,236,501	-		Shewana3_1055	0.13	+0.2
1,236,729	-		Shewana3_1055	0.22	-0.4
1,236,833	-		Shewana3_1055	0.26	+1.3