Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0873

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
1,017,714	+		Shewana3_0872	0.16	+3.0
1,017,746	-		Shewana3_0872	0.22	-0.0
1,017,746	-		Shewana3_0872	0.22	-1.0
1,017,799	-		Shewana3_0872	0.32	-0.4
1,017,916	+		Shewana3_0872	0.54	-0.2
1,017,916	+		Shewana3_0872	0.54	+2.5
1,017,955	+		Shewana3_0872	0.62	+0.4
1,017,968	-		Shewana3_0872	0.64	-0.6
1,018,001	+		Shewana3_0872	0.70	+1.2
1,018,290	+				-0.4
1,018,298	-				-0.0
1,018,335	+				+0.2
1,018,490	-				-1.3
1,018,702	+		Shewana3_0873	0.28	-1.0
1,019,004	+		Shewana3_0873	0.58	+0.4
1,019,012	-		Shewana3_0873	0.59	-0.8
1,019,396	+				-0.6
1,019,429	+				-0.1
1,019,872	+		Shewana3_0874	0.42	-0.2
1,020,039	+		Shewana3_0874	0.65	+0.1
1,020,093	+		Shewana3_0874	0.72	-1.7
1,020,100	+		Shewana3_0874	0.73	-0.4
1,020,186	-		Shewana3_0874	0.84	+1.1
1,020,295	-				-0.0
1,020,295	-				+0.2
1,020,310	+				-0.8