Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0740

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
859,225	+		Shewana3_0739	0.69	-0.6
859,225	+		Shewana3_0739	0.69	-0.7
859,233	-		Shewana3_0739	0.69	+0.5
859,233	-		Shewana3_0739	0.69	-0.1
859,233	-		Shewana3_0739	0.69	+0.2
859,233	-		Shewana3_0739	0.69	+0.8
859,233	-		Shewana3_0739	0.69	-0.7
859,233	-		Shewana3_0739	0.69	-0.2
859,233	-		Shewana3_0739	0.69	-0.4
859,469	-		Shewana3_0739	0.84	-0.7
859,470	-		Shewana3_0739	0.84	-0.1
859,617	+				-0.3
859,705	-				-1.0
860,039	+				-2.1
860,188	+		Shewana3_0740	0.25	-0.5
860,302	-		Shewana3_0740	0.59	-0.5
860,327	+		Shewana3_0740	0.67	-1.7
860,335	-		Shewana3_0740	0.69	+1.1
860,336	-		Shewana3_0740	0.69	-0.2
860,433	+				-1.3
860,479	-				-0.3
860,779	+				-0.3
861,256	+	modC	Shewana3_0741	0.53	-0.6
861,305	-	modC	Shewana3_0741	0.58	-0.0
861,305	-	modC	Shewana3_0741	0.58	-1.1
861,331	+	modC	Shewana3_0741	0.60	+0.2
861,375	+	modC	Shewana3_0741	0.64	-1.9
861,399	+	modC	Shewana3_0741	0.66	-0.7