Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0095

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
104,385	-		Shewana3_0093	0.48	+0.8
104,783	-		Shewana3_0094	0.23	-0.3
104,792	+		Shewana3_0094	0.25	-0.3
104,843	+		Shewana3_0094	0.32	-0.2
105,130	-		Shewana3_0094	0.77	-0.1
105,369	+				-0.4
105,411	+				+0.1
105,569	+		Shewana3_0095	0.10	+0.1
105,570	+		Shewana3_0095	0.10	-0.4
105,570	-		Shewana3_0095	0.10	+0.0
105,570	-		Shewana3_0095	0.10	-0.1
105,674	+		Shewana3_0095	0.16	-0.3
105,725	+		Shewana3_0095	0.19	-0.4
105,733	-		Shewana3_0095	0.19	+0.0
105,800	-		Shewana3_0095	0.22	-0.4
105,818	+		Shewana3_0095	0.23	-0.3
105,821	-		Shewana3_0095	0.24	-0.0
105,867	+		Shewana3_0095	0.26	-0.5
105,867	+		Shewana3_0095	0.26	-0.5
105,875	-		Shewana3_0095	0.26	-0.2
105,875	-		Shewana3_0095	0.26	-0.5
105,875	-		Shewana3_0095	0.26	-0.6
105,922	+		Shewana3_0095	0.29	-0.2
105,970	+		Shewana3_0095	0.31	-0.2
105,978	-		Shewana3_0095	0.32	+0.1
105,978	-		Shewana3_0095	0.32	-0.4
105,978	-		Shewana3_0095	0.32	-0.6
106,070	-		Shewana3_0095	0.37	-0.5
106,101	-		Shewana3_0095	0.38	-0.2
106,236	+		Shewana3_0095	0.45	-1.1
106,275	-		Shewana3_0095	0.47	-0.4
106,329	-		Shewana3_0095	0.50	-0.2
106,472	-		Shewana3_0095	0.58	-0.7
106,516	-		Shewana3_0095	0.60	-0.3
106,559	+		Shewana3_0095	0.62	+0.4
106,724	+		Shewana3_0095	0.71	-0.3
106,797	+		Shewana3_0095	0.75	+0.0
106,909	+		Shewana3_0095	0.81	-1.0
106,932	+		Shewana3_0095	0.82	-0.3
106,945	-		Shewana3_0095	0.82	-0.2
106,964	-		Shewana3_0095	0.83	-0.2
106,977	+		Shewana3_0095	0.84	-0.1
107,060	-		Shewana3_0095	0.89	-0.1
107,068	+		Shewana3_0095	0.89	-0.3
107,076	-		Shewana3_0095	0.89	-0.7
107,111	-				+0.6
107,111	-				-0.2
107,166	+				-0.4
107,174	-				-0.1
107,197	+				-1.9
107,203	+				-0.6
107,330	-				-0.7
107,572	+				-1.1
107,582	+				-1.0
107,582	+				-0.9
107,582	+				+1.0
107,582	+				-0.4
107,693	-		Shewana3_0096	0.34	+2.4
107,759	+		Shewana3_0096	0.49	-2.4
107,838	+		Shewana3_0096	0.68	-5.5
107,987	+				-0.3
108,027	-				+0.3
108,027	-				+0.1
108,075	-				+0.6
108,158	+		Shewana3_0097	0.20	+0.4
108,166	-		Shewana3_0097	0.21	+0.6
108,187	+		Shewana3_0097	0.23	+0.2