Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4279

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
159,902	+		Shewana3_4278	0.21	-0.7
160,023	+		Shewana3_4278	0.38	+0.1
160,036	+		Shewana3_4278	0.40	-0.7
160,187	-		Shewana3_4278	0.61	+0.6
160,311	+		Shewana3_4278	0.78	+0.9
160,389	+		Shewana3_4278	0.89	+0.1
160,430	+				-0.1
160,446	+				-0.5
160,446	+				-0.1
160,446	+				-0.4
160,451	+				-0.1
160,451	+				-0.5
160,454	-				-0.8
160,454	-				-0.7
160,454	-				-0.2
160,454	-				-1.1
160,499	-				+0.3
160,547	+				-0.6
160,605	+				-0.4
160,608	-				-0.3
160,664	+				-1.1
160,919	-		Shewana3_4279	0.15	-0.1
160,926	-		Shewana3_4279	0.16	-1.4
161,111	+		Shewana3_4279	0.57	-0.6
161,235	-		Shewana3_4279	0.85	-0.9
161,254	-		Shewana3_4279	0.89	+0.3
161,298	+				-1.3
161,306	-				-1.6
161,306	-				+0.1
161,312	+				-0.7
161,312	-				-0.1
161,320	-				+0.2
161,320	-				+0.4
161,544	+				+0.4
161,544	+				-0.1
161,768	-				-1.2
161,774	-				-0.9
161,908	+				+0.4
161,933	-		Shewana3_4280	0.11	+0.9
161,964	-		Shewana3_4280	0.12	-0.2
162,001	-		Shewana3_4280	0.14	+0.3
162,031	+		Shewana3_4280	0.15	-0.2
162,169	-		Shewana3_4280	0.21	+1.5
162,263	-		Shewana3_4280	0.25	-1.5