Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4148

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
7,199	-		Shewana3_4147	0.53	+0.5
7,205	+		Shewana3_4147	0.53	-0.1
7,205	+		Shewana3_4147	0.53	+0.3
7,205	+		Shewana3_4147	0.53	+0.2
7,213	-		Shewana3_4147	0.54	+0.2
7,223	-		Shewana3_4147	0.54	-0.8
7,223	-		Shewana3_4147	0.54	+0.0
7,239	-		Shewana3_4147	0.56	+0.2
7,239	-		Shewana3_4147	0.56	-1.2
7,239	-		Shewana3_4147	0.56	-0.6
7,239	-		Shewana3_4147	0.56	+0.6
7,239	-		Shewana3_4147	0.56	-0.2
7,341	-		Shewana3_4147	0.64	+0.0
7,487	+		Shewana3_4147	0.76	-0.3
7,692	+				-0.3
7,787	-				-0.4
7,788	-				-0.8
7,788	-				-0.1
7,815	+				+0.2
7,815	+				-2.2
7,821	+				-0.1
7,823	-				-0.6
7,841	+				-1.3
7,841	+				+0.1
7,841	+				+0.1
7,849	-				-1.0
7,849	-				-0.9
7,856	+				-1.4
7,859	+				+0.5
7,917	+				+0.4
8,018	+				-0.4
8,068	+				-0.6
8,081	+				-0.0
8,097	-				-0.1
8,156	-				+0.1
8,207	+				-0.5
8,215	-				-1.3
8,233	-		Shewana3_4148	0.13	-0.8
8,267	+		Shewana3_4148	0.21	+0.7
8,319	+		Shewana3_4148	0.34	-0.8
8,332	+		Shewana3_4148	0.38	-0.9
8,342	+		Shewana3_4148	0.40	-1.1
8,443	+		Shewana3_4148	0.65	-0.6
8,450	+		Shewana3_4148	0.67	+1.3
8,517	-		Shewana3_4148	0.84	-0.6
8,517	-		Shewana3_4148	0.84	-1.1
8,517	-		Shewana3_4148	0.84	+0.3
8,519	+		Shewana3_4148	0.84	+0.9
8,527	-		Shewana3_4148	0.86	-0.2
8,527	-		Shewana3_4148	0.86	-0.8
8,527	-		Shewana3_4148	0.86	-0.5
8,588	+				+0.8
8,628	+				-0.0
8,731	+				+1.0
8,731	+				-1.5
8,739	+				-0.2
8,739	-				-0.7
8,739	-				+0.1
8,739	-				-0.3
8,739	-				+0.2
8,739	-				+0.9
8,739	-				-1.9
8,741	+				-0.1
8,747	-				+0.3
8,747	-				-0.8
8,761	+				-0.3
8,761	+				-2.0
8,769	-				-0.3
8,843	+				-1.3
8,853	+				+0.3
8,853	+				+0.5
8,855	+				-0.9
8,855	+				+0.7
8,855	+				+1.9
8,855	+				-0.1
8,863	-				-0.3
8,879	+				-1.7
8,885	+				+0.8
8,910	+				-0.3
8,911	+				+0.3
8,919	-				-0.3
9,003	+				-1.6
9,003	+				+0.1
9,088	-				-0.8
9,229	+				+0.2
9,229	+				-0.5
9,339	-				-0.2
9,404	-				+0.2
9,493	-				-0.1
9,493	-				-0.0
9,493	-				-0.2
9,493	-				-0.1