Strain Fitness in Shewanella loihica PV-4 around Shew_3669

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
4,370,836	+		Shew_3668	0.32	+0.9
4,370,844	-		Shew_3668	0.33	+0.6
4,370,850	+		Shew_3668	0.34	+1.3
4,370,850	+		Shew_3668	0.34	+0.1
4,370,858	-		Shew_3668	0.35	+0.1
4,371,159	+		Shew_3668	0.66	-0.6
4,371,159	+		Shew_3668	0.66	-0.7
4,371,192	+		Shew_3668	0.69	+0.2
4,371,327	+		Shew_3668	0.84	-0.1
4,371,362	-		Shew_3668	0.87	-0.1
4,371,552	+				-0.1
4,371,555	-				-0.1
4,371,598	-				+0.2
4,371,758	+				+0.1
4,371,848	+		Shew_3669	0.14	-0.4
4,371,853	+		Shew_3669	0.15	-0.4
4,371,863	+		Shew_3669	0.16	-0.0
4,371,967	+		Shew_3669	0.31	-0.7
4,371,975	-		Shew_3669	0.32	-0.0
4,372,011	+		Shew_3669	0.37	+0.3
4,372,221	-		Shew_3669	0.66	+0.0
4,372,258	-		Shew_3669	0.71	-0.1
4,372,407	+				+0.6
4,372,531	+				-0.3
4,372,989	-		Shew_3670	0.32	+0.5
4,373,098	-		Shew_3670	0.41	+0.1
4,373,104	+		Shew_3670	0.42	-1.7
4,373,111	+		Shew_3670	0.42	-0.0
4,373,244	+		Shew_3670	0.53	-0.9
4,373,295	+		Shew_3670	0.58	-0.5
4,373,410	+		Shew_3670	0.67	+0.1