Strain Fitness in Shewanella loihica PV-4 around Shew_3343

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
3,986,541	+		Shew_3341	0.81	+0.4
3,986,588	+		Shew_3341	0.86	+0.0
3,986,711	-				-0.1
3,986,836	-				-0.5
3,986,836	-				+0.4
3,986,949	-				-0.1
3,987,043	+		Shew_3342	0.21	-0.1
3,987,352	-		Shew_3342	0.79	-0.8
3,987,523	-				-0.2
3,988,158	-		Shew_3343	0.56	+0.7
3,988,209	-		Shew_3343	0.60	-0.5
3,988,293	+		Shew_3343	0.67	+0.0
3,988,488	-		Shew_3343	0.82	-0.4
3,988,514	-		Shew_3343	0.84	-1.3
3,988,603	-				+0.4
3,988,894	+		Shew_3344	0.19	-0.3
3,988,933	+		Shew_3344	0.23	+0.4
3,988,999	+		Shew_3344	0.30	+0.1
3,989,273	-		Shew_3344	0.60	+0.1
3,989,456	-		Shew_3344	0.80	+0.0
3,989,456	-		Shew_3344	0.80	-0.1
3,989,536	-		Shew_3344	0.88	-0.1
3,989,561	-				-0.8