Strain Fitness in Shewanella loihica PV-4 around Shew_3257

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
3,892,909	-		Shew_3256	0.12	+0.0
3,892,961	+		Shew_3256	0.18	-0.6
3,893,027	-		Shew_3256	0.24	-3.6
3,893,069	-		Shew_3256	0.29	+0.2
3,893,182	-		Shew_3256	0.41	+0.1
3,893,801	-				-0.3
3,893,834	-				-0.1
3,894,020	-		Shew_3257	0.16	-0.0
3,894,058	-		Shew_3257	0.18	-0.2
3,894,156	-		Shew_3257	0.23	-0.1
3,894,198	+		Shew_3257	0.26	-1.1
3,894,264	+		Shew_3257	0.30	-0.8
3,894,304	-		Shew_3257	0.32	-0.9
3,894,367	+		Shew_3257	0.36	-0.0
3,894,437	-		Shew_3257	0.40	+0.1
3,894,613	-		Shew_3257	0.50	-0.2
3,894,779	+		Shew_3257	0.59	-0.2
3,894,827	+		Shew_3257	0.62	-0.0
3,895,257	+		Shew_3257	0.87	+0.2
3,895,265	-		Shew_3257	0.87	-0.0
3,895,265	-		Shew_3257	0.87	+0.3
3,895,265	-		Shew_3257	0.87	+1.1
3,895,265	-		Shew_3257	0.87	-0.2
3,895,324	-				-0.1
3,895,339	+				-0.9
3,895,382	+				-0.6
3,895,390	-				+0.6
3,895,664	+				+0.0
3,895,668	+				-0.4
3,895,762	+				+0.0
3,895,770	-				+0.2
3,895,777	-				+0.1
3,896,019	+		Shew_3258	0.38	+0.1
3,896,029	+		Shew_3258	0.40	+0.5
3,896,075	-		Shew_3258	0.46	+0.2
3,896,155	-		Shew_3258	0.57	+0.1
3,896,161	+		Shew_3258	0.58	-0.0
3,896,161	+		Shew_3258	0.58	+0.1
3,896,161	+		Shew_3258	0.58	-0.3
3,896,169	-		Shew_3258	0.59	+0.2
3,896,169	-		Shew_3258	0.59	-0.2
3,896,217	-		Shew_3258	0.66	-0.0
3,896,279	+		Shew_3258	0.75	+0.2