Strain Fitness in Shewanella loihica PV-4 around Shew_3175

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
3,778,869	+		Shew_3174	0.34	+0.4
3,778,869	-		Shew_3174	0.34	-0.3
3,779,036	-		Shew_3174	0.52	+0.0
3,779,170	+		Shew_3174	0.66	-0.2
3,779,454	+				-0.2
3,779,495	+				-0.1
3,779,503	-				-0.3
3,779,503	-				+0.2
3,779,503	-				-0.1
3,779,532	-				-0.5
3,779,790	+				+0.2
3,780,422	-		Shew_3175	0.58	+0.2
3,780,436	-		Shew_3175	0.59	+0.3
3,780,436	-		Shew_3175	0.59	-0.2
3,780,541	-		Shew_3175	0.67	+0.6
3,780,755	+		Shew_3175	0.84	+0.6
3,781,026	-				+0.0
3,781,139	-				+0.3
3,781,265	+				+0.0
3,781,423	-		Shew_3176	0.14	-0.0