Strain Fitness in Shewanella loihica PV-4 around Shew_3072

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
3,646,461	-				+0.4
3,646,531	+				-0.5
3,646,531	+				-0.6
3,646,714	-				-0.0
3,646,770	+				+0.7
3,647,017	+		Shew_3071	0.38	+1.2
3,647,030	-		Shew_3071	0.40	+1.7
3,647,214	-		Shew_3071	0.76	+0.1
3,647,228	-		Shew_3071	0.79	+0.0
3,647,286	+				+0.2
3,647,286	+				+0.2
3,647,883	+		Shew_3072	0.90	-1.0
3,647,891	-				+0.2
3,647,948	-				-1.8
3,648,004	-				+0.4
3,648,282	-		Shew_3073	0.23	-0.1
3,648,446	+		Shew_3073	0.48	-0.2
3,648,622	+		Shew_3073	0.74	+0.4
3,648,630	-		Shew_3073	0.75	-0.1
3,648,630	-		Shew_3073	0.75	+0.1
3,648,631	-		Shew_3073	0.75	-0.1
3,648,636	-		Shew_3073	0.76	+0.6
3,648,663	-		Shew_3073	0.80	+0.7
3,648,912	+				+0.2