Strain Fitness in Shewanella loihica PV-4 around Shew_2908

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
3,446,396	+		Shew_2906	0.54	-1.8
3,446,404	-		Shew_2906	0.55	-1.1
3,446,960	+		Shew_2907	0.53	-1.8
3,446,960	+		Shew_2907	0.53	-3.0
3,446,968	-		Shew_2907	0.55	-1.2
3,447,258	-				-0.1
3,447,265	+				-0.4
3,447,334	+				-1.1
3,447,334	+				-0.5
3,447,625	+		Shew_2908	0.38	+0.7
3,447,633	-		Shew_2908	0.39	+0.3
3,447,749	+		Shew_2908	0.51	+0.1
3,447,749	+		Shew_2908	0.51	-0.1
3,447,935	+		Shew_2908	0.71	+0.4
3,447,943	-		Shew_2908	0.72	+0.4
3,447,970	-		Shew_2908	0.75	+0.0
3,448,007	+		Shew_2908	0.79	+0.4
3,448,015	-		Shew_2908	0.80	+0.2
3,448,015	-		Shew_2908	0.80	+0.5
3,448,104	-		Shew_2908	0.89	+0.4
3,448,287	-				-0.1
3,448,648	-				-0.1
3,448,888	-		Shew_2910	0.49	-0.4
3,449,038	+				-3.5
3,449,038	+				+1.0
3,449,038	+				-0.0
3,449,046	-				-0.5
3,449,046	-				+0.1
3,449,064	+				+0.4