Strain Fitness in Shewanella loihica PV-4 around Shew_2896

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
3,433,099	-		Shew_2895	0.27	+1.5
3,433,183	+		Shew_2895	0.36	+0.6
3,433,191	-		Shew_2895	0.37	+0.9
3,433,222	+		Shew_2895	0.40	+1.2
3,433,224	-		Shew_2895	0.40	+0.9
3,433,320	+		Shew_2895	0.51	+0.9
3,433,373	-		Shew_2895	0.57	-0.0
3,433,373	-		Shew_2895	0.57	+1.4
3,433,395	-		Shew_2895	0.59	+1.0
3,433,655	+		Shew_2895	0.87	+0.5
3,433,696	-				+0.9
3,433,779	+				-0.6
3,433,779	+				+0.1
3,433,779	+				+0.7
3,433,787	-				-0.1
3,433,787	-				-0.3
3,433,787	-				+0.3
3,433,946	-				-0.0
3,434,023	-				-0.2
3,434,154	+		Shew_2896	0.16	+0.3
3,434,545	-		Shew_2896	0.41	+0.9
3,434,587	+		Shew_2896	0.44	+0.3
3,435,014	-		Shew_2896	0.72	+0.5
3,435,072	-		Shew_2896	0.76	+0.4
3,436,206	+		Shew_2897	0.70	+1.7
3,436,243	+		Shew_2897	0.74	-0.1
3,436,243	+		Shew_2897	0.74	-0.6
3,436,243	+		Shew_2897	0.74	-0.2
3,436,251	-		Shew_2897	0.75	-1.3