Strain Fitness in Shewanella loihica PV-4 around Shew_2337

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
2,730,792	-	tgt	Shew_2337	0.19	-0.6
2,731,167	-	tgt	Shew_2337	0.53	-1.8
2,731,179	+	tgt	Shew_2337	0.54	+0.5
2,731,192	+	tgt	Shew_2337	0.55	-1.4
2,731,212	-	tgt	Shew_2337	0.57	-0.3
2,731,297	-	tgt	Shew_2337	0.64	-0.5
2,731,363	-	tgt	Shew_2337	0.70	-0.5
2,731,497	+	tgt	Shew_2337	0.82	-1.2
2,731,830	+				-0.1
2,731,830	+				+0.3
2,731,838	-				-0.0
2,731,941	-				+0.1
2,732,617	-		Shew_2338	0.72	+0.7