Strain Fitness in Shewanella loihica PV-4 around Shew_1649

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
1,894,510	-		Shew_1648	0.76	-0.0
1,894,821	-		Shew_1648	0.85	+0.1
1,895,136	-				+0.2
1,895,189	-				-0.2
1,895,434	+		Shew_1649	0.11	-1.7
1,895,459	+		Shew_1649	0.13	-0.1
1,896,029	+		Shew_1649	0.67	-1.5
1,896,630	-				-0.8
1,896,672	+				-0.1
1,896,672	+				-0.4
1,896,948	+				+0.4
1,897,177	-				-1.0
1,897,182	-				-0.8