Strain Fitness in Shewanella loihica PV-4 around Shew_1570

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
1,800,035	+				+0.2
1,800,252	+	aat	Shew_1569	0.28	+0.1
1,800,268	-	aat	Shew_1569	0.30	+0.5
1,800,462	+	aat	Shew_1569	0.58	+0.2
1,800,658	-	aat	Shew_1569	0.85	-0.9
1,800,666	-	aat	Shew_1569	0.86	+0.4
1,800,743	+				-0.1
1,800,876	+		Shew_1570	0.12	-1.3
1,800,980	-		Shew_1570	0.34	-0.7
1,801,105	+		Shew_1570	0.59	-0.1
1,801,488	-		Shew_1571	0.15	-0.1
1,801,535	+		Shew_1571	0.28	+0.5
1,801,580	+		Shew_1571	0.40	-0.2
1,801,920	-				+0.0