Strain Fitness in Shewanella loihica PV-4 around Shew_0688

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
780,864	-				+0.1
781,023	+				+0.6
781,031	-				-0.7
781,154	+		Shew_0687	0.23	+0.2
781,258	+		Shew_0687	0.39	+0.8
781,358	+		Shew_0687	0.54	+0.1
781,492	-		Shew_0687	0.74	+0.6
781,742	-				+0.3
781,777	+				+0.3
781,907	+		Shew_0688	0.13	+1.3
782,037	-		Shew_0688	0.33	+0.5
782,037	-		Shew_0688	0.33	+0.2
782,440	-				+0.4
782,440	+				+0.5
783,331	+		Shew_0689	0.64	+0.0
783,339	-		Shew_0689	0.65	-0.4