Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3156

Experiment: BHIS with Benzethonium chloride 0.002 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Benzethonium chloride 0.002 mM
4,019,844	-		BT3155	0.68	+0.3
4,019,844	-		BT3155	0.68	+0.6
4,019,847	-		BT3155	0.69	+0.6
4,019,991	-		BT3155	0.74	+0.0
4,019,991	-		BT3155	0.74	+0.1
4,020,024	-		BT3155	0.76	+0.0
4,020,117	+		BT3155	0.80	-0.7
4,020,133	+		BT3155	0.80	+0.6
4,020,133	+		BT3155	0.80	+0.3
4,020,134	-		BT3155	0.80	-0.0
4,020,143	+		BT3155	0.81	-1.4
4,020,143	+		BT3155	0.81	+1.5
4,020,164	-		BT3155	0.82	-0.1
4,020,169	-		BT3155	0.82	-0.6
4,020,214	-		BT3155	0.84	+2.1
4,020,335	+		BT3155	0.89	+1.6
4,020,347	+		BT3155	0.89	+0.3
4,020,348	-		BT3155	0.89	+1.6
4,020,437	+				+0.7
4,020,450	-				+0.0
4,020,563	-				+1.6
4,020,563	-				+0.6
4,020,564	+				+1.6
4,020,565	-				-1.1
4,020,586	-				-0.9
4,020,592	-				-3.9
4,020,592	-				+0.6
4,020,596	+				-0.6
4,020,597	-				-3.4
4,020,607	+				+1.1
4,020,607	+				-0.7
4,020,651	+				-1.1
4,020,652	-				+1.5
4,020,657	-				-0.8
4,020,673	+				+0.0
4,020,726	-				-0.2
4,020,726	-				-0.3
4,020,726	-				-2.0
4,020,726	-				-0.6
4,020,726	-				-0.3
4,020,727	+				+1.9
4,020,788	+				+0.2
4,020,808	+				+1.7
4,020,827	-				-1.7
4,020,880	-				+0.8
4,020,904	+				-0.4
4,020,904	+				+0.8
4,020,906	+				+0.5
4,020,906	+				+1.6
4,020,907	-				+1.9
4,020,907	-				-0.7
4,020,908	+				-0.1
4,020,937	-				+0.0
4,020,961	+				+0.8
4,020,974	-				-1.4
4,021,016	-				-1.7
4,021,055	-				-1.6
4,021,056	+				-1.3
4,021,057	-				-3.1
4,021,059	+				+0.5
4,021,102	-				-1.5
4,021,106	-				+0.5
4,021,106	-				+2.7
4,021,106	-				-0.9
4,021,119	-				-1.4
4,021,131	+				+0.3
4,021,144	+		BT3156	0.10	+1.6
4,021,201	-		BT3156	0.12	+0.6
4,021,216	+		BT3156	0.13	+0.8
4,021,217	-		BT3156	0.13	+0.4
4,021,222	-		BT3156	0.13	-0.4
4,021,222	-		BT3156	0.13	-1.6
4,021,222	-		BT3156	0.13	+1.6
4,021,249	+		BT3156	0.14	+0.5
4,021,367	+		BT3156	0.17	-2.1
4,021,412	-		BT3156	0.19	+0.6
4,021,474	+		BT3156	0.21	-0.7
4,021,490	+		BT3156	0.21	-3.3
4,021,532	-		BT3156	0.23	-0.0
4,021,561	-		BT3156	0.23	+1.1
4,021,584	+		BT3156	0.24	-0.7
4,021,638	+		BT3156	0.26	+1.6
4,021,642	+		BT3156	0.26	+0.8
4,021,694	-		BT3156	0.28	-0.2
4,021,707	-		BT3156	0.28	+0.8
4,021,751	+		BT3156	0.29	-0.4
4,021,752	-		BT3156	0.29	+1.6
4,021,786	-		BT3156	0.31	+0.5
4,021,792	+		BT3156	0.31	+1.3
4,021,797	-		BT3156	0.31	+0.6
4,021,816	-		BT3156	0.31	+0.3
4,021,819	+		BT3156	0.32	-0.4
4,021,822	+		BT3156	0.32	+1.4
4,021,827	+		BT3156	0.32	-1.1
4,021,827	+		BT3156	0.32	+0.8
4,021,828	-		BT3156	0.32	+0.0
4,021,848	+		BT3156	0.32	-0.8
4,021,853	+		BT3156	0.33	-0.3
4,021,856	+		BT3156	0.33	-1.1
4,021,857	-		BT3156	0.33	+1.6
4,021,857	-		BT3156	0.33	+0.9
4,021,860	+		BT3156	0.33	-2.1
4,021,871	+		BT3156	0.33	+0.2
4,021,872	-		BT3156	0.33	-2.1
4,021,873	+		BT3156	0.33	-3.0
4,021,904	-		BT3156	0.34	+0.9
4,021,904	-		BT3156	0.34	-1.7
4,021,916	+		BT3156	0.35	-0.6
4,021,916	+		BT3156	0.35	-1.9
4,021,917	-		BT3156	0.35	+0.7
4,021,925	-		BT3156	0.35	-0.7
4,021,925	-		BT3156	0.35	+0.0
4,021,925	-		BT3156	0.35	+0.4
4,021,925	-		BT3156	0.35	-1.2
4,021,930	+		BT3156	0.35	+1.2
4,021,958	-		BT3156	0.36	-1.2
4,021,958	-		BT3156	0.36	+0.7
4,021,960	+		BT3156	0.36	-2.2
4,021,961	-		BT3156	0.36	+0.1
4,021,967	-		BT3156	0.36	+1.9
4,021,984	+		BT3156	0.37	-1.7
4,022,025	-		BT3156	0.38	-1.2
4,022,027	-		BT3156	0.38	+0.7
4,022,058	-		BT3156	0.39	-1.9
4,022,060	-		BT3156	0.39	-0.4
4,022,086	+		BT3156	0.40	-1.1
4,022,095	+		BT3156	0.40	+0.5
4,022,095	+		BT3156	0.40	-0.2
4,022,120	+		BT3156	0.41	-1.7
4,022,120	+		BT3156	0.41	+0.7
4,022,131	+		BT3156	0.41	-1.6
4,022,143	-		BT3156	0.42	-0.3
4,022,143	-		BT3156	0.42	+1.5
4,022,169	-		BT3156	0.43	+0.1
4,022,169	-		BT3156	0.43	+0.6
4,022,173	+		BT3156	0.43	-1.1
4,022,174	-				+1.6
4,022,188	+		BT3156	0.43	-1.6
4,022,195	-		BT3156	0.43	-0.1
4,022,221	-		BT3156	0.44	+1.3
4,022,292	+		BT3156	0.46	-0.1
4,022,293	-		BT3156	0.47	+0.6
4,022,296	+		BT3156	0.47	+0.9
4,022,296	+		BT3156	0.47	-1.1
4,022,345	+		BT3156	0.48	+0.9
4,022,351	+		BT3156	0.48	+2.2
4,022,363	+		BT3156	0.49	+0.7
4,022,381	-		BT3156	0.49	-0.7
4,022,384	+		BT3156	0.49	-0.7
4,022,387	-		BT3156	0.49	+0.7
4,022,387	-		BT3156	0.49	-0.2
4,022,404	-		BT3156	0.50	+1.2
4,022,426	+		BT3156	0.51	+0.6
4,022,446	+		BT3156	0.51	+0.6
4,022,455	+		BT3156	0.52	-1.7
4,022,456	-		BT3156	0.52	-0.5
4,022,463	-		BT3156	0.52	-1.4
4,022,467	-		BT3156	0.52	-0.7
4,022,523	+		BT3156	0.54	-1.6
4,022,526	+		BT3156	0.54	+0.5
4,022,526	+		BT3156	0.54	-0.5
4,022,527	-		BT3156	0.54	+1.0
4,022,527	-		BT3156	0.54	+1.0
4,022,527	-		BT3156	0.54	-1.4
4,022,528	+		BT3156	0.54	+1.6
4,022,529	-		BT3156	0.54	+0.6
4,022,569	-		BT3156	0.55	+0.0
4,022,614	+		BT3156	0.57	+0.0
4,022,615	-		BT3156	0.57	-1.1
4,022,615	-		BT3156	0.57	+1.2
4,022,624	+		BT3156	0.57	+0.4
4,022,624	+		BT3156	0.57	+1.4
4,022,726	+		BT3156	0.60	-0.4
4,022,726	+		BT3156	0.60	-0.4
4,022,761	-				+1.6
4,022,763	+		BT3156	0.61	+0.6
4,022,799	-		BT3156	0.62	+0.7
4,022,799	-		BT3156	0.62	+0.4
4,022,812	+		BT3156	0.63	+1.6
4,022,813	-		BT3156	0.63	+0.6
4,022,928	+		BT3156	0.67	+1.4
4,022,929	-		BT3156	0.67	+0.3
4,023,000	+		BT3156	0.69	-1.4
4,023,001	-		BT3156	0.69	+0.5
4,023,005	-		BT3156	0.69	-0.9
4,023,080	+		BT3156	0.71	+0.9
4,023,091	+		BT3156	0.72	+1.2
4,023,115	-		BT3156	0.72	-0.0
4,023,122	-		BT3156	0.73	-1.3
4,023,126	+		BT3156	0.73	+0.2
4,023,127	-		BT3156	0.73	-1.5
4,023,167	+		BT3156	0.74	+0.6
4,023,168	-		BT3156	0.74	+0.0
4,023,174	-		BT3156	0.74	+0.0
4,023,174	-		BT3156	0.74	+0.6
4,023,184	+		BT3156	0.75	+2.0
4,023,212	-		BT3156	0.75	+0.1
4,023,237	-		BT3156	0.76	-0.5
4,023,237	-		BT3156	0.76	+1.3
4,023,260	+		BT3156	0.77	-0.6
4,023,261	-		BT3156	0.77	+1.6
4,023,261	-		BT3156	0.77	+1.6
4,023,289	+		BT3156	0.78	+2.6
4,023,318	-		BT3156	0.79	-0.4
4,023,340	-		BT3156	0.80	+0.9
4,023,416	-		BT3156	0.82	+0.6
4,023,416	-		BT3156	0.82	-0.7
4,023,416	-		BT3156	0.82	-2.4
4,023,419	+		BT3156	0.82	+0.4
4,023,420	-		BT3156	0.82	-1.1
4,023,433	+		BT3156	0.82	-2.3
4,023,482	-		BT3156	0.84	-1.3
4,023,496	+		BT3156	0.84	+2.4
4,023,545	-		BT3156	0.86	+2.2
4,023,571	-		BT3156	0.87	+0.6
4,023,571	-		BT3156	0.87	+0.6
4,023,615	-		BT3156	0.88	+1.6
4,023,615	-		BT3156	0.88	+0.3
4,023,658	+		BT3156	0.90	-1.2
4,023,659	-		BT3156	0.90	+0.3
4,023,659	-		BT3156	0.90	+3.0
4,023,659	-		BT3156	0.90	+0.7
4,023,691	+				+0.2
4,023,696	+				+0.3
4,023,696	+				-0.7
4,023,717	+				+0.7
4,023,755	-				+0.8
4,023,811	+				-0.9
4,023,812	-				-0.2
4,023,812	-				-0.4
4,023,863	+				-1.9
4,023,864	-				+0.9
4,023,864	-				+0.6
4,023,878	-				-2.2
4,023,882	+				+0.1
4,023,883	-				+0.1
4,023,886	-				-1.7
4,023,886	-				+0.9
4,023,907	-				+0.3
4,023,937	-				+0.6
4,023,937	-				+0.0
4,023,942	-				-1.3
4,023,959	+				-0.4
4,023,960	-				+0.8
4,023,962	-				-0.7
4,023,962	-				+0.0
4,024,018	+				+0.4
4,024,019	-				-1.2
4,024,021	-				-2.6
4,024,073	+				-1.0
4,024,073	+				+1.4
4,024,073	+				-1.5
4,024,074	-				+0.0
4,024,074	-				+0.0
4,024,106	+				+4.2
4,024,106	+				-1.4
4,024,107	-				-0.0
4,024,107	-				+1.0
4,024,136	-				-0.1
4,024,222	+		BT3157	0.11	-2.2
4,024,223	-		BT3157	0.11	-1.0
4,024,224	+		BT3157	0.11	+0.4
4,024,225	-		BT3157	0.11	-0.9
4,024,225	-		BT3157	0.11	+0.6
4,024,231	-		BT3157	0.11	-1.3
4,024,234	-		BT3157	0.12	-2.1
4,024,266	+		BT3157	0.13	+1.2
4,024,300	+		BT3157	0.15	+0.4
4,024,357	-		BT3157	0.18	+1.3
4,024,357	-		BT3157	0.18	+0.5
4,024,365	+		BT3157	0.18	+0.3
4,024,365	+		BT3157	0.18	+0.0
4,024,366	-		BT3157	0.18	-2.7
4,024,369	-		BT3157	0.18	-0.3
4,024,381	+		BT3157	0.19	+0.0
4,024,386	-		BT3157	0.19	+1.2
4,024,399	-		BT3157	0.20	-0.2
4,024,449	-		BT3157	0.22	-0.1
4,024,454	+		BT3157	0.23	-1.2
4,024,493	-		BT3157	0.24	+0.3
4,024,506	+		BT3157	0.25	-2.2
4,024,511	+		BT3157	0.25	-0.2
4,024,530	-		BT3157	0.26	-2.1
4,024,551	-		BT3157	0.27	-0.7
4,024,580	+		BT3157	0.29	+0.3
4,024,588	+		BT3157	0.29	+0.2
4,024,589	-		BT3157	0.29	+0.0
4,024,596	-		BT3157	0.30	+1.1
4,024,604	+		BT3157	0.30	+1.0
4,024,704	-		BT3157	0.35	+1.0
4,024,719	+		BT3157	0.36	-2.6
4,024,747	+		BT3157	0.37	+0.9
4,024,748	-		BT3157	0.37	-0.4
4,024,748	-		BT3157	0.37	-1.7
4,024,844	+		BT3157	0.42	-1.2
4,024,901	-		BT3157	0.45	-1.3
4,024,902	+		BT3157	0.45	-0.4
4,024,903	-		BT3157	0.45	-0.3
4,024,931	-		BT3157	0.46	+0.1
4,024,969	-		BT3157	0.48	+0.1
4,024,983	-		BT3157	0.49	+0.0