Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2486

Experiment: BHIS with Benzethonium chloride 0.002 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Benzethonium chloride 0.002 mM
3,107,379	+		BT2485	0.21	-0.2
3,107,385	-		BT2485	0.22	+0.8
3,107,393	-		BT2485	0.22	+1.2
3,107,393	-		BT2485	0.22	-0.7
3,107,393	-		BT2485	0.22	+0.6
3,107,420	+		BT2485	0.25	+1.2
3,107,421	-		BT2485	0.25	-1.1
3,107,468	+		BT2485	0.29	-0.9
3,107,469	-		BT2485	0.29	-0.3
3,107,469	-		BT2485	0.29	+1.0
3,107,471	+		BT2485	0.29	+0.6
3,107,471	+		BT2485	0.29	-0.6
3,107,471	+		BT2485	0.29	+0.8
3,107,472	-		BT2485	0.30	+0.2
3,107,550	+		BT2485	0.37	+0.6
3,107,553	+		BT2485	0.37	-2.9
3,107,684	+		BT2485	0.49	+1.2
3,107,684	+		BT2485	0.49	+0.1
3,107,684	+		BT2485	0.49	+1.2
3,107,684	+		BT2485	0.49	-0.6
3,107,686	+		BT2485	0.49	+1.2
3,107,732	+		BT2485	0.53	+1.9
3,107,773	-		BT2485	0.57	-0.1
3,107,798	-		BT2485	0.59	-0.4
3,107,810	+		BT2485	0.60	-1.9
3,107,853	-		BT2485	0.64	+0.3
3,107,856	+		BT2485	0.64	-1.0
3,107,868	-		BT2485	0.65	+1.2
3,107,913	-		BT2485	0.70	+0.4
3,107,916	-		BT2485	0.70	+0.1
3,107,916	-		BT2485	0.70	-1.5
3,107,916	-		BT2485	0.70	-0.8
3,107,926	+		BT2485	0.71	+1.2
3,107,944	-		BT2485	0.72	-1.1
3,107,947	+		BT2485	0.73	-2.4
3,107,947	+		BT2485	0.73	-1.1
3,107,974	+		BT2485	0.75	+1.2
3,108,063	-		BT2485	0.83	+1.5
3,108,064	+		BT2485	0.83	-1.4
3,108,064	+		BT2485	0.83	-0.8
3,108,064	+		BT2485	0.83	-0.4
3,108,065	-		BT2485	0.83	-2.7
3,108,065	-		BT2485	0.83	+0.2
3,108,113	+		BT2485	0.88	+1.2
3,108,113	+		BT2485	0.88	-1.0
3,108,188	+				+0.5
3,108,267	+				-0.0
3,108,272	-				-0.4
3,108,310	+				+1.5
3,108,320	+				-0.5
3,108,327	+				-0.5
3,108,334	-				+0.6
3,108,349	-				-0.9
3,108,407	-				-1.0
3,108,408	+				+1.5
3,108,409	-				-1.1
3,108,412	+				+0.6
3,108,413	-				+0.4
3,108,433	-				-1.4
3,108,434	+				+1.2
3,108,511	+				-0.2
3,108,539	+				+0.8
3,108,595	+				+2.4
3,108,617	+				-0.3
3,108,622	+				+1.2
3,108,623	-				+0.2
3,108,664	+		BT2486	0.11	-0.4
3,108,745	+		BT2486	0.14	-1.4
3,108,745	+		BT2486	0.14	-1.3
3,108,768	-		BT2486	0.14	-0.9
3,108,768	-		BT2486	0.14	+0.1
3,108,774	+		BT2486	0.14	+0.3
3,108,782	-		BT2486	0.15	-0.1
3,108,792	+		BT2486	0.15	-0.3
3,108,796	+		BT2486	0.15	-0.5
3,108,797	-		BT2486	0.15	-0.3
3,108,797	-		BT2486	0.15	-0.9
3,108,804	+		BT2486	0.15	+1.2
3,108,804	+		BT2486	0.15	+0.0
3,108,826	+		BT2486	0.16	+0.2
3,108,826	+		BT2486	0.16	+0.5
3,108,829	+		BT2486	0.16	+0.8
3,108,884	+		BT2486	0.18	+1.2
3,108,922	+		BT2486	0.19	-0.5
3,108,926	-		BT2486	0.19	+1.2
3,108,932	+		BT2486	0.20	-2.5
3,108,933	-		BT2486	0.20	+0.0
3,108,933	-		BT2486	0.20	+0.2
3,108,949	+		BT2486	0.20	+0.1
3,109,043	+		BT2486	0.23	+0.2
3,109,043	+		BT2486	0.23	+0.3
3,109,044	-		BT2486	0.23	-2.6
3,109,051	+		BT2486	0.24	-1.6
3,109,052	-		BT2486	0.24	+1.2
3,109,054	+				+1.2
3,109,055	-		BT2486	0.24	-1.1
3,109,057	+		BT2486	0.24	+1.2
3,109,063	+		BT2486	0.24	-1.4
3,109,064	-		BT2486	0.24	-1.1
3,109,072	+		BT2486	0.24	-0.3
3,109,100	-		BT2486	0.25	+0.4
3,109,100	-		BT2486	0.25	-1.6
3,109,100	-		BT2486	0.25	-1.4
3,109,106	+		BT2486	0.25	+0.8
3,109,165	+		BT2486	0.27	+0.7
3,109,191	+		BT2486	0.28	-0.8
3,109,225	+		BT2486	0.29	+0.7
3,109,226	-		BT2486	0.29	-0.9
3,109,226	-		BT2486	0.29	+0.2
3,109,226	-		BT2486	0.29	+0.1
3,109,226	-		BT2486	0.29	-0.8
3,109,226	-		BT2486	0.29	+0.3
3,109,227	+		BT2486	0.29	-0.5
3,109,227	+		BT2486	0.29	+0.2
3,109,267	+		BT2486	0.31	-1.4
3,109,267	+		BT2486	0.31	-1.6
3,109,268	-		BT2486	0.31	+0.1
3,109,268	-		BT2486	0.31	+0.9
3,109,268	-		BT2486	0.31	+0.8
3,109,295	-		BT2486	0.32	-1.4
3,109,295	-		BT2486	0.32	-0.9
3,109,300	+		BT2486	0.32	+0.1
3,109,300	+		BT2486	0.32	-0.8
3,109,301	-		BT2486	0.32	-0.1
3,109,303	+		BT2486	0.32	-0.2
3,109,317	+		BT2486	0.32	-0.7
3,109,318	-		BT2486	0.32	+1.2
3,109,344	+		BT2486	0.33	-0.1
3,109,348	+		BT2486	0.33	+0.3
3,109,354	+		BT2486	0.33	-0.7
3,109,362	+		BT2486	0.34	+1.5
3,109,398	+		BT2486	0.35	-0.4
3,109,409	-		BT2486	0.35	+0.5
3,109,420	+		BT2486	0.36	-0.1
3,109,439	-		BT2486	0.36	-0.8
3,109,517	+		BT2486	0.39	-1.1
3,109,518	-		BT2486	0.39	-0.9
3,109,546	-		BT2486	0.40	-1.4
3,109,548	+		BT2486	0.40	-0.4
3,109,548	+		BT2486	0.40	+0.4
3,109,548	+		BT2486	0.40	-0.9
3,109,577	+		BT2486	0.41	+0.2
3,109,577	+		BT2486	0.41	-1.1
3,109,610	-		BT2486	0.42	+0.5
3,109,646	-		BT2486	0.43	-0.5
3,109,674	+		BT2486	0.44	-1.7
3,109,675	-		BT2486	0.44	+1.1
3,109,675	-		BT2486	0.44	-0.3
3,109,675	-		BT2486	0.44	-0.6
3,109,675	-		BT2486	0.44	-0.9
3,109,685	-		BT2486	0.44	-0.6
3,109,714	+		BT2486	0.45	-1.1
3,109,748	+		BT2486	0.46	-0.4
3,109,749	-		BT2486	0.46	-0.5
3,109,749	-		BT2486	0.46	-0.3
3,109,793	+		BT2486	0.48	+0.2
3,109,794	-		BT2486	0.48	-2.1
3,109,853	+		BT2486	0.50	-1.8
3,109,868	-		BT2486	0.50	-1.9
3,109,915	+		BT2486	0.52	-0.7
3,109,916	-		BT2486	0.52	-1.0
3,109,970	+		BT2486	0.54	-0.2
3,109,970	+		BT2486	0.54	-1.3
3,109,971	-		BT2486	0.54	+1.2
3,109,971	-		BT2486	0.54	-0.4
3,109,971	-		BT2486	0.54	-2.9
3,110,006	-		BT2486	0.55	+1.2
3,110,006	-		BT2486	0.55	+1.5
3,110,067	+		BT2486	0.57	-2.4
3,110,111	+		BT2486	0.58	-2.2
3,110,134	-		BT2486	0.59	+0.5
3,110,134	-		BT2486	0.59	-0.9
3,110,173	+		BT2486	0.60	+0.1
3,110,188	+		BT2486	0.61	-1.8
3,110,239	+		BT2486	0.63	-0.4
3,110,256	+		BT2486	0.63	-0.1
3,110,257	-		BT2486	0.63	-0.9
3,110,267	+		BT2486	0.63	-3.2
3,110,268	-		BT2486	0.63	-0.6
3,110,275	+		BT2486	0.64	-1.2
3,110,357	-		BT2486	0.66	+0.2
3,110,422	+		BT2486	0.69	-2.7
3,110,474	+		BT2486	0.70	-2.3
3,110,478	-		BT2486	0.70	+0.2
3,110,497	+		BT2486	0.71	-0.2
3,110,498	-		BT2486	0.71	+0.8
3,110,501	-		BT2486	0.71	-0.8
3,110,505	-		BT2486	0.71	-2.4
3,110,507	+		BT2486	0.71	-2.2
3,110,507	+		BT2486	0.71	+0.1
3,110,508	-		BT2486	0.71	+0.8
3,110,554	+		BT2486	0.73	-0.2
3,110,601	-		BT2486	0.74	+0.3
3,110,601	-		BT2486	0.74	-0.5
3,110,629	-		BT2486	0.75	+3.2
3,110,654	-		BT2486	0.76	-2.6
3,110,660	+		BT2486	0.76	+0.2
3,110,677	+		BT2486	0.77	-0.6
3,110,680	+		BT2486	0.77	-0.1
3,110,680	+		BT2486	0.77	+1.2
3,110,681	-		BT2486	0.77	-0.8
3,110,681	-		BT2486	0.77	-0.4
3,110,681	-		BT2486	0.77	+0.6
3,110,683	-		BT2486	0.77	-1.1
3,110,689	-		BT2486	0.77	-0.4
3,110,725	+		BT2486	0.78	-0.4
3,110,726	-		BT2486	0.78	+0.6
3,110,738	+		BT2486	0.79	-0.5
3,110,739	-		BT2486	0.79	-1.5
3,110,739	-		BT2486	0.79	-0.5
3,110,739	-		BT2486	0.79	-0.1
3,110,758	+		BT2486	0.80	+1.1
3,110,759	-		BT2486	0.80	+0.2
3,110,765	-		BT2486	0.80	-0.1
3,110,784	-		BT2486	0.80	-1.1
3,110,808	+		BT2486	0.81	+0.1
3,110,814	+		BT2486	0.81	+0.7
3,110,866	+		BT2486	0.83	-0.4
3,110,867	-		BT2486	0.83	-1.1
3,110,868	+		BT2486	0.83	-0.3
3,110,868	+		BT2486	0.83	+1.2
3,110,871	+		BT2486	0.83	-1.6
3,110,871	+		BT2486	0.83	-2.5
3,110,872	-		BT2486	0.83	-0.2
3,110,982	+		BT2486	0.87	-1.0
3,110,982	+		BT2486	0.87	-0.8
3,110,986	+		BT2486	0.87	-2.9
3,111,070	+		BT2486	0.90	-0.2
3,111,116	-				-0.0
3,111,148	+				+0.8
3,111,282	-				+0.5
3,111,310	+				-0.5
3,111,447	+				+0.8
3,111,447	+				-0.6
3,111,454	+				+0.5
3,111,475	+				+0.2
3,111,504	+				-0.6
3,111,518	-				-1.6
3,111,547	+				-0.7
3,111,587	-				+0.6
3,111,653	-		BT2487	0.28	-1.6
3,111,753	-				+0.2
3,111,766	-				-0.7
3,111,848	+		BT2488	0.10	-2.8
3,111,867	+		BT2488	0.12	-0.3
3,111,867	+		BT2488	0.12	+0.9
3,111,868	-		BT2488	0.12	+0.0
3,111,918	-		BT2488	0.18	+0.5
3,111,918	-		BT2488	0.18	+0.1
3,111,918	-		BT2488	0.18	-0.4
3,111,921	-		BT2488	0.18	-1.1
3,111,951	+		BT2488	0.21	-1.0
3,111,952	-		BT2488	0.21	+0.8
3,111,970	-		BT2488	0.23	-0.6
3,112,008	-		BT2488	0.27	+1.4
3,112,008	-		BT2488	0.27	-0.6
3,112,041	+		BT2488	0.31	+0.5
3,112,041	+		BT2488	0.31	-2.7
3,112,042	-		BT2488	0.31	+1.1
3,112,042	-		BT2488	0.31	+1.5
3,112,044	-		BT2488	0.31	-3.1
3,112,044	-		BT2488	0.31	+2.1
3,112,044	-		BT2488	0.31	-0.8
3,112,044	-		BT2488	0.31	-0.5
3,112,113	+		BT2488	0.38	+0.2
3,112,114	-		BT2488	0.38	-0.6
3,112,187	+		BT2488	0.46	-1.1
3,112,191	+		BT2488	0.46	+0.0
3,112,192	-		BT2488	0.47	+0.4
3,112,208	-		BT2488	0.48	-0.5
3,112,209	+		BT2488	0.48	-1.0
3,112,210	-		BT2488	0.48	-0.8
3,112,210	-		BT2488	0.48	-1.6
3,112,210	-		BT2488	0.48	+0.7
3,112,267	+		BT2488	0.54	+1.6
3,112,270	+		BT2488	0.55	+0.8
3,112,270	+		BT2488	0.55	-0.4
3,112,338	+		BT2488	0.62	+0.9
3,112,338	+		BT2488	0.62	-1.1