Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3000

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,489,389	+		Pf6N2E2_2998	0.73	+0.1
3,489,390	-		Pf6N2E2_2998	0.74	-1.4
3,489,440	-		Pf6N2E2_2998	0.78	+0.2
3,489,455	-		Pf6N2E2_2998	0.79	-0.2
3,489,684	+				-0.1
3,489,685	-				-0.2
3,489,695	+				-0.1
3,489,695	+				+0.0
3,489,696	-				-0.8
3,490,000	+		Pf6N2E2_2999	0.57	+1.0
3,490,000	+		Pf6N2E2_2999	0.57	+1.1
3,490,096	-		Pf6N2E2_2999	0.76	-0.3
3,490,149	-		Pf6N2E2_2999	0.86	+1.3
3,490,189	+				+0.1
3,490,189	+				+1.3
3,490,190	-				-0.6
3,490,259	-				+1.1
3,490,259	-				-1.5
3,490,274	-				-0.6
3,490,429	+		Pf6N2E2_3000	0.18	+0.3
3,490,438	+		Pf6N2E2_3000	0.19	-0.5
3,490,477	+		Pf6N2E2_3000	0.23	-0.3
3,490,477	+		Pf6N2E2_3000	0.23	+0.5
3,490,477	+		Pf6N2E2_3000	0.23	+0.6
3,490,477	+		Pf6N2E2_3000	0.23	+0.5
3,490,477	+		Pf6N2E2_3000	0.23	-1.3
3,490,477	+		Pf6N2E2_3000	0.23	-1.5
3,490,477	+				+1.1
3,490,477	+		Pf6N2E2_3000	0.23	-0.3
3,490,477	+		Pf6N2E2_3000	0.23	-0.3
3,490,477	+		Pf6N2E2_3000	0.23	+1.0
3,490,477	+		Pf6N2E2_3000	0.23	+0.0
3,490,477	+		Pf6N2E2_3000	0.23	-2.5
3,490,477	+		Pf6N2E2_3000	0.23	-0.5
3,490,477	+		Pf6N2E2_3000	0.23	+0.4
3,490,478	-		Pf6N2E2_3000	0.23	-0.3
3,490,478	-		Pf6N2E2_3000	0.23	+0.7
3,490,478	-		Pf6N2E2_3000	0.23	+0.6
3,490,478	-		Pf6N2E2_3000	0.23	+0.5
3,490,478	-		Pf6N2E2_3000	0.23	+0.7
3,490,478	-		Pf6N2E2_3000	0.23	-2.2
3,490,478	-		Pf6N2E2_3000	0.23	-0.0
3,490,478	-		Pf6N2E2_3000	0.23	+1.3
3,490,478	-		Pf6N2E2_3000	0.23	+1.3
3,490,478	-		Pf6N2E2_3000	0.23	+2.3
3,490,478	-		Pf6N2E2_3000	0.23	-1.3
3,490,478	-		Pf6N2E2_3000	0.23	-0.4
3,490,478	-		Pf6N2E2_3000	0.23	+0.9
3,490,478	-		Pf6N2E2_3000	0.23	+2.8
3,490,479	+		Pf6N2E2_3000	0.23	+0.8
3,490,522	+		Pf6N2E2_3000	0.26	-1.3
3,490,522	+		Pf6N2E2_3000	0.26	-1.1
3,490,545	+		Pf6N2E2_3000	0.28	+0.9
3,490,545	+		Pf6N2E2_3000	0.28	-0.1
3,490,545	+		Pf6N2E2_3000	0.28	+0.6
3,490,545	+		Pf6N2E2_3000	0.28	+0.5
3,490,545	+		Pf6N2E2_3000	0.28	-0.6
3,490,545	+		Pf6N2E2_3000	0.28	+1.0
3,490,545	+		Pf6N2E2_3000	0.28	-1.1
3,490,545	+		Pf6N2E2_3000	0.28	+1.6
3,490,545	+		Pf6N2E2_3000	0.28	-0.9
3,490,546	-		Pf6N2E2_3000	0.29	+0.3
3,490,546	-		Pf6N2E2_3000	0.29	+0.7
3,490,546	-		Pf6N2E2_3000	0.29	+0.3
3,490,551	+		Pf6N2E2_3000	0.29	+0.4
3,490,551	+		Pf6N2E2_3000	0.29	+1.2
3,490,551	+		Pf6N2E2_3000	0.29	+1.2
3,490,551	+		Pf6N2E2_3000	0.29	-0.3
3,490,551	+		Pf6N2E2_3000	0.29	+1.2
3,490,551	+		Pf6N2E2_3000	0.29	+0.1
3,490,551	+		Pf6N2E2_3000	0.29	-0.5
3,490,551	+		Pf6N2E2_3000	0.29	+1.0
3,490,551	+		Pf6N2E2_3000	0.29	+0.5
3,490,552	-		Pf6N2E2_3000	0.29	+1.7
3,490,552	-		Pf6N2E2_3000	0.29	+0.7
3,490,552	-		Pf6N2E2_3000	0.29	+0.8
3,490,552	-		Pf6N2E2_3000	0.29	+0.2
3,490,668	+		Pf6N2E2_3000	0.39	+0.9
3,490,669	-		Pf6N2E2_3000	0.39	-0.5
3,490,669	-		Pf6N2E2_3000	0.39	+0.8
3,490,688	+		Pf6N2E2_3000	0.41	+0.0
3,490,688	+		Pf6N2E2_3000	0.41	+1.0
3,490,689	-		Pf6N2E2_3000	0.41	+1.4
3,490,722	+		Pf6N2E2_3000	0.44	-1.7
3,490,722	+		Pf6N2E2_3000	0.44	+0.1
3,490,722	+		Pf6N2E2_3000	0.44	-1.5
3,490,723	-		Pf6N2E2_3000	0.44	-0.0
3,490,723	-		Pf6N2E2_3000	0.44	-0.6
3,490,723	-		Pf6N2E2_3000	0.44	+1.2
3,490,860	+		Pf6N2E2_3000	0.55	-0.5
3,490,860	+		Pf6N2E2_3000	0.55	+0.9
3,490,861	-		Pf6N2E2_3000	0.56	+1.0
3,490,861	-		Pf6N2E2_3000	0.56	-1.1
3,490,879	+		Pf6N2E2_3000	0.57	+0.2
3,490,879	+		Pf6N2E2_3000	0.57	+0.4
3,490,880	-		Pf6N2E2_3000	0.57	+1.3
3,490,881	+		Pf6N2E2_3000	0.57	+0.8
3,490,881	+		Pf6N2E2_3000	0.57	+0.5
3,490,881	+		Pf6N2E2_3000	0.57	-0.3
3,490,881	+		Pf6N2E2_3000	0.57	+2.2
3,490,882	-		Pf6N2E2_3000	0.57	-0.9
3,490,882	-		Pf6N2E2_3000	0.57	-0.1
3,490,882	-		Pf6N2E2_3000	0.57	-0.6
3,490,882	-		Pf6N2E2_3000	0.57	-0.6
3,490,882	-		Pf6N2E2_3000	0.57	+0.7
3,490,882	-		Pf6N2E2_3000	0.57	+1.1
3,490,882	-		Pf6N2E2_3000	0.57	-0.2
3,490,923	+		Pf6N2E2_3000	0.61	-0.3
3,490,924	-		Pf6N2E2_3000	0.61	-0.6
3,490,924	-		Pf6N2E2_3000	0.61	-1.1
3,490,971	+		Pf6N2E2_3000	0.65	-0.9
3,490,971	+		Pf6N2E2_3000	0.65	-0.0
3,490,971	+		Pf6N2E2_3000	0.65	-0.4
3,490,972	-		Pf6N2E2_3000	0.65	-0.4
3,490,976	-		Pf6N2E2_3000	0.65	+0.5
3,490,976	-		Pf6N2E2_3000	0.65	-3.1
3,491,000	+		Pf6N2E2_3000	0.68	+1.3
3,491,001	-		Pf6N2E2_3000	0.68	-0.2
3,491,001	-		Pf6N2E2_3000	0.68	-0.2
3,491,001	-		Pf6N2E2_3000	0.68	+2.0
3,491,001	-		Pf6N2E2_3000	0.68	-0.2
3,491,001	-		Pf6N2E2_3000	0.68	+0.2
3,491,001	-		Pf6N2E2_3000	0.68	-2.2
3,491,001	-		Pf6N2E2_3000	0.68	-1.6
3,491,025	+		Pf6N2E2_3000	0.70	-1.6
3,491,025	+		Pf6N2E2_3000	0.70	+1.7
3,491,025	+		Pf6N2E2_3000	0.70	+0.3
3,491,025	+		Pf6N2E2_3000	0.70	-0.3
3,491,026	-		Pf6N2E2_3000	0.70	+0.3
3,491,026	-		Pf6N2E2_3000	0.70	+1.2
3,491,026	-		Pf6N2E2_3000	0.70	+2.9
3,491,026	-		Pf6N2E2_3000	0.70	+0.6
3,491,026	-		Pf6N2E2_3000	0.70	-0.9
3,491,026	-		Pf6N2E2_3000	0.70	+1.6
3,491,384	-				-0.6
3,491,397	-				-0.4
3,491,397	-				-1.2
3,491,397	-				-0.5
3,491,397	-				+0.5
3,491,397	-				+0.3
3,491,397	-				+0.8
3,491,416	-				-0.5
3,491,666	+		Pf6N2E2_3001	0.46	-0.7
3,491,666	+		Pf6N2E2_3001	0.46	-0.4
3,491,666	+		Pf6N2E2_3001	0.46	+0.7
3,491,667	-		Pf6N2E2_3001	0.46	+0.7
3,491,667	-		Pf6N2E2_3001	0.46	+0.4
3,491,669	+		Pf6N2E2_3001	0.47	+0.2
3,491,669	+		Pf6N2E2_3001	0.47	-0.0
3,491,669	+		Pf6N2E2_3001	0.47	-0.4
3,491,669	+		Pf6N2E2_3001	0.47	+0.8
3,491,669	+		Pf6N2E2_3001	0.47	-1.3
3,491,669	+		Pf6N2E2_3001	0.47	+1.3
3,491,670	-		Pf6N2E2_3001	0.47	-1.6
3,491,670	-		Pf6N2E2_3001	0.47	-1.0
3,491,732	+		Pf6N2E2_3001	0.57	-0.3
3,491,732	+		Pf6N2E2_3001	0.57	-1.0
3,491,733	-		Pf6N2E2_3001	0.57	-1.6
3,491,804	-		Pf6N2E2_3001	0.69	+0.5
3,491,804	-		Pf6N2E2_3001	0.69	-1.2
3,491,804	-		Pf6N2E2_3001	0.69	+0.5
3,491,961	-				+1.2
3,491,961	-				+0.4
3,491,977	+				-0.2
3,491,978	-				+0.5
3,491,978	-				+1.5
3,492,280	+		Pf6N2E2_3002	0.29	-0.9
3,492,281	-		Pf6N2E2_3002	0.29	-0.2
3,492,281	-		Pf6N2E2_3002	0.29	-0.3
3,492,373	+		Pf6N2E2_3002	0.38	-0.6