Experiment: Thallium(I) acetate 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2174 and Ga0059261_2175 are separated by 162 nucleotides Ga0059261_2175 and Ga0059261_2176 are separated by 108 nucleotides Ga0059261_2176 and Ga0059261_2177 overlap by 47 nucleotides
Ga0059261_2174: Ga0059261_2174 - Transcriptional regulator, at 2,285,811 to 2,286,698
_2174
Ga0059261_2175: Ga0059261_2175 - RNA, at 2,286,861 to 2,286,938
_2175
Ga0059261_2176: Ga0059261_2176 - AAA family ATPase, CDC48 subfamily, at 2,287,047 to 2,289,338
_2176
Ga0059261_2177: Ga0059261_2177 - Arabinose efflux permease, at 2,289,292 to 2,290,596
_2177
Position (kb)
2287
2288
2289
2290 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2286.739 kb on - strand at 2286.766 kb on - strand at 2286.954 kb on + strand at 2286.955 kb on - strand at 2286.955 kb on - strand at 2286.986 kb on + strand at 2286.987 kb on - strand at 2286.987 kb on - strand at 2286.987 kb on - strand at 2286.987 kb on - strand at 2286.987 kb on - strand at 2286.987 kb on - strand at 2286.987 kb on - strand at 2286.987 kb on - strand at 2287.216 kb on + strand at 2287.216 kb on + strand at 2287.515 kb on + strand, within Ga0059261_2176 at 2287.515 kb on + strand, within Ga0059261_2176 at 2287.515 kb on + strand, within Ga0059261_2176 at 2287.516 kb on - strand, within Ga0059261_2176 at 2287.516 kb on - strand, within Ga0059261_2176 at 2287.516 kb on - strand, within Ga0059261_2176 at 2287.574 kb on + strand, within Ga0059261_2176 at 2287.575 kb on - strand, within Ga0059261_2176 at 2287.575 kb on - strand, within Ga0059261_2176 at 2287.586 kb on + strand, within Ga0059261_2176 at 2287.586 kb on + strand, within Ga0059261_2176 at 2287.587 kb on - strand, within Ga0059261_2176 at 2287.611 kb on + strand, within Ga0059261_2176 at 2287.611 kb on + strand, within Ga0059261_2176 at 2287.611 kb on + strand, within Ga0059261_2176 at 2287.612 kb on - strand, within Ga0059261_2176 at 2287.612 kb on - strand, within Ga0059261_2176 at 2287.612 kb on - strand, within Ga0059261_2176 at 2287.627 kb on - strand, within Ga0059261_2176 at 2287.650 kb on + strand, within Ga0059261_2176 at 2287.650 kb on + strand, within Ga0059261_2176 at 2287.650 kb on + strand, within Ga0059261_2176 at 2287.650 kb on + strand, within Ga0059261_2176 at 2287.650 kb on + strand, within Ga0059261_2176 at 2287.650 kb on + strand, within Ga0059261_2176 at 2287.650 kb on + strand, within Ga0059261_2176 at 2287.650 kb on + strand, within Ga0059261_2176 at 2287.651 kb on - strand, within Ga0059261_2176 at 2287.651 kb on - strand, within Ga0059261_2176 at 2287.651 kb on - strand, within Ga0059261_2176 at 2287.651 kb on - strand, within Ga0059261_2176 at 2287.651 kb on - strand, within Ga0059261_2176 at 2287.651 kb on - strand, within Ga0059261_2176 at 2287.651 kb on - strand, within Ga0059261_2176 at 2287.651 kb on - strand, within Ga0059261_2176 at 2287.720 kb on - strand, within Ga0059261_2176 at 2287.878 kb on + strand, within Ga0059261_2176 at 2287.878 kb on + strand at 2287.879 kb on - strand, within Ga0059261_2176 at 2287.879 kb on - strand, within Ga0059261_2176 at 2288.182 kb on + strand, within Ga0059261_2176 at 2288.182 kb on + strand, within Ga0059261_2176 at 2288.182 kb on + strand, within Ga0059261_2176 at 2288.182 kb on + strand, within Ga0059261_2176 at 2288.182 kb on + strand, within Ga0059261_2176 at 2288.182 kb on + strand, within Ga0059261_2176 at 2288.592 kb on + strand, within Ga0059261_2176 at 2288.592 kb on + strand, within Ga0059261_2176 at 2288.592 kb on + strand, within Ga0059261_2176 at 2288.592 kb on + strand, within Ga0059261_2176 at 2288.592 kb on + strand, within Ga0059261_2176 at 2288.592 kb on + strand, within Ga0059261_2176 at 2288.593 kb on - strand, within Ga0059261_2176 at 2288.593 kb on - strand, within Ga0059261_2176 at 2288.593 kb on - strand, within Ga0059261_2176 at 2288.697 kb on + strand, within Ga0059261_2176 at 2288.697 kb on + strand, within Ga0059261_2176 at 2288.698 kb on - strand, within Ga0059261_2176 at 2288.698 kb on - strand, within Ga0059261_2176 at 2288.970 kb on + strand, within Ga0059261_2176 at 2288.970 kb on + strand, within Ga0059261_2176 at 2288.970 kb on + strand, within Ga0059261_2176 at 2288.970 kb on + strand, within Ga0059261_2176 at 2288.970 kb on + strand, within Ga0059261_2176 at 2288.970 kb on + strand, within Ga0059261_2176 at 2288.970 kb on + strand, within Ga0059261_2176 at 2288.971 kb on - strand at 2288.971 kb on - strand, within Ga0059261_2176 at 2288.971 kb on - strand, within Ga0059261_2176 at 2288.971 kb on - strand, within Ga0059261_2176 at 2288.971 kb on - strand, within Ga0059261_2176 at 2288.971 kb on - strand, within Ga0059261_2176 at 2288.971 kb on - strand, within Ga0059261_2176 at 2288.971 kb on - strand, within Ga0059261_2176 at 2288.971 kb on - strand, within Ga0059261_2176 at 2288.971 kb on - strand, within Ga0059261_2176 at 2288.971 kb on - strand, within Ga0059261_2176 at 2289.005 kb on + strand, within Ga0059261_2176 at 2289.006 kb on - strand, within Ga0059261_2176 at 2289.234 kb on + strand at 2289.234 kb on + strand at 2289.234 kb on + strand at 2289.234 kb on + strand at 2289.235 kb on - strand at 2289.235 kb on - strand at 2289.235 kb on - strand at 2289.347 kb on + strand at 2289.348 kb on - strand at 2289.348 kb on - strand at 2289.348 kb on - strand at 2289.386 kb on + strand at 2289.386 kb on + strand at 2289.386 kb on + strand at 2289.387 kb on - strand at 2289.387 kb on - strand at 2289.411 kb on - strand at 2289.411 kb on - strand at 2289.569 kb on + strand, within Ga0059261_2177 at 2289.569 kb on + strand, within Ga0059261_2177 at 2289.569 kb on + strand, within Ga0059261_2177 at 2289.569 kb on + strand, within Ga0059261_2177 at 2289.569 kb on + strand, within Ga0059261_2177 at 2289.570 kb on - strand, within Ga0059261_2177 at 2289.570 kb on - strand, within Ga0059261_2177 at 2289.570 kb on - strand, within Ga0059261_2177 at 2289.587 kb on + strand, within Ga0059261_2177 at 2289.587 kb on + strand, within Ga0059261_2177 at 2289.587 kb on + strand, within Ga0059261_2177 at 2289.587 kb on + strand, within Ga0059261_2177 at 2289.588 kb on - strand, within Ga0059261_2177 at 2289.588 kb on - strand, within Ga0059261_2177 at 2289.588 kb on - strand, within Ga0059261_2177 at 2289.875 kb on + strand, within Ga0059261_2177 at 2289.875 kb on + strand, within Ga0059261_2177 at 2289.876 kb on - strand at 2289.876 kb on - strand, within Ga0059261_2177 at 2289.876 kb on - strand, within Ga0059261_2177 at 2289.950 kb on + strand, within Ga0059261_2177 at 2289.950 kb on + strand, within Ga0059261_2177 at 2289.950 kb on + strand, within Ga0059261_2177 at 2289.950 kb on + strand, within Ga0059261_2177 at 2289.950 kb on + strand, within Ga0059261_2177 at 2289.950 kb on + strand, within Ga0059261_2177 at 2289.950 kb on + strand, within Ga0059261_2177 at 2289.951 kb on - strand, within Ga0059261_2177 at 2289.951 kb on - strand, within Ga0059261_2177 at 2289.951 kb on - strand, within Ga0059261_2177 at 2289.959 kb on - strand, within Ga0059261_2177 at 2290.033 kb on + strand, within Ga0059261_2177 at 2290.033 kb on + strand, within Ga0059261_2177 at 2290.033 kb on + strand, within Ga0059261_2177 at 2290.033 kb on + strand, within Ga0059261_2177 at 2290.034 kb on - strand, within Ga0059261_2177 at 2290.034 kb on - strand, within Ga0059261_2177 at 2290.034 kb on - strand, within Ga0059261_2177 at 2290.109 kb on + strand, within Ga0059261_2177 at 2290.110 kb on - strand, within Ga0059261_2177 at 2290.110 kb on - strand, within Ga0059261_2177 at 2290.110 kb on - strand, within Ga0059261_2177 at 2290.253 kb on + strand, within Ga0059261_2177 at 2290.253 kb on + strand, within Ga0059261_2177 at 2290.253 kb on + strand, within Ga0059261_2177 at 2290.254 kb on - strand, within Ga0059261_2177 at 2290.254 kb on - strand, within Ga0059261_2177
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.005 mg/ml remove 2,286,739 - -0.8 2,286,766 - -0.9 2,286,954 + -0.1 2,286,955 - +0.1 2,286,955 - +0.1 2,286,986 + -0.4 2,286,987 - +0.3 2,286,987 - +0.4 2,286,987 - -0.2 2,286,987 - +0.7 2,286,987 - -0.4 2,286,987 - -0.3 2,286,987 - +0.0 2,286,987 - -0.1 2,287,216 + -0.6 2,287,216 + +1.0 2,287,515 + Ga0059261_2176 0.20 -0.3 2,287,515 + Ga0059261_2176 0.20 -0.3 2,287,515 + Ga0059261_2176 0.20 -0.1 2,287,516 - Ga0059261_2176 0.20 +0.2 2,287,516 - Ga0059261_2176 0.20 +0.1 2,287,516 - Ga0059261_2176 0.20 +0.1 2,287,574 + Ga0059261_2176 0.23 +0.7 2,287,575 - Ga0059261_2176 0.23 -0.3 2,287,575 - Ga0059261_2176 0.23 -0.7 2,287,586 + Ga0059261_2176 0.24 +0.3 2,287,586 + Ga0059261_2176 0.24 -1.7 2,287,587 - Ga0059261_2176 0.24 +0.5 2,287,611 + Ga0059261_2176 0.25 +0.3 2,287,611 + Ga0059261_2176 0.25 -0.9 2,287,611 + Ga0059261_2176 0.25 +0.2 2,287,612 - Ga0059261_2176 0.25 +0.7 2,287,612 - Ga0059261_2176 0.25 +2.0 2,287,612 - Ga0059261_2176 0.25 +0.6 2,287,627 - Ga0059261_2176 0.25 -0.4 2,287,650 + Ga0059261_2176 0.26 +0.3 2,287,650 + Ga0059261_2176 0.26 +0.9 2,287,650 + Ga0059261_2176 0.26 +0.2 2,287,650 + Ga0059261_2176 0.26 -1.3 2,287,650 + Ga0059261_2176 0.26 -0.7 2,287,650 + Ga0059261_2176 0.26 +1.2 2,287,650 + Ga0059261_2176 0.26 -1.5 2,287,650 + Ga0059261_2176 0.26 +1.6 2,287,651 - Ga0059261_2176 0.26 -0.7 2,287,651 - Ga0059261_2176 0.26 +0.6 2,287,651 - Ga0059261_2176 0.26 -1.4 2,287,651 - Ga0059261_2176 0.26 +0.4 2,287,651 - Ga0059261_2176 0.26 -0.7 2,287,651 - Ga0059261_2176 0.26 +0.3 2,287,651 - Ga0059261_2176 0.26 +0.4 2,287,651 - Ga0059261_2176 0.26 +0.7 2,287,720 - Ga0059261_2176 0.29 +0.1 2,287,878 + Ga0059261_2176 0.36 +0.1 2,287,878 + +0.1 2,287,879 - Ga0059261_2176 0.36 +0.9 2,287,879 - Ga0059261_2176 0.36 -0.7 2,288,182 + Ga0059261_2176 0.50 +0.6 2,288,182 + Ga0059261_2176 0.50 +1.2 2,288,182 + Ga0059261_2176 0.50 -0.2 2,288,182 + Ga0059261_2176 0.50 -0.1 2,288,182 + Ga0059261_2176 0.50 -0.5 2,288,182 + Ga0059261_2176 0.50 +0.1 2,288,592 + Ga0059261_2176 0.67 -1.4 2,288,592 + Ga0059261_2176 0.67 -0.0 2,288,592 + Ga0059261_2176 0.67 -0.9 2,288,592 + Ga0059261_2176 0.67 +0.7 2,288,592 + Ga0059261_2176 0.67 +0.7 2,288,592 + Ga0059261_2176 0.67 -1.4 2,288,593 - Ga0059261_2176 0.67 +0.5 2,288,593 - Ga0059261_2176 0.67 +0.7 2,288,593 - Ga0059261_2176 0.67 +0.6 2,288,697 + Ga0059261_2176 0.72 +0.8 2,288,697 + Ga0059261_2176 0.72 +0.3 2,288,698 - Ga0059261_2176 0.72 -1.8 2,288,698 - Ga0059261_2176 0.72 +0.3 2,288,970 + Ga0059261_2176 0.84 -0.5 2,288,970 + Ga0059261_2176 0.84 -0.2 2,288,970 + Ga0059261_2176 0.84 -0.5 2,288,970 + Ga0059261_2176 0.84 -0.1 2,288,970 + Ga0059261_2176 0.84 +0.1 2,288,970 + Ga0059261_2176 0.84 +0.2 2,288,970 + Ga0059261_2176 0.84 -0.3 2,288,971 - +0.2 2,288,971 - Ga0059261_2176 0.84 +0.1 2,288,971 - Ga0059261_2176 0.84 -0.0 2,288,971 - Ga0059261_2176 0.84 -0.3 2,288,971 - Ga0059261_2176 0.84 +0.1 2,288,971 - Ga0059261_2176 0.84 -0.1 2,288,971 - Ga0059261_2176 0.84 -0.6 2,288,971 - Ga0059261_2176 0.84 +0.1 2,288,971 - Ga0059261_2176 0.84 -0.6 2,288,971 - Ga0059261_2176 0.84 +0.1 2,288,971 - Ga0059261_2176 0.84 +1.1 2,289,005 + Ga0059261_2176 0.85 +0.1 2,289,006 - Ga0059261_2176 0.85 +0.3 2,289,234 + -0.2 2,289,234 + +0.4 2,289,234 + +0.2 2,289,234 + -1.6 2,289,235 - -0.4 2,289,235 - -0.6 2,289,235 - -0.1 2,289,347 + -1.0 2,289,348 - +1.0 2,289,348 - -1.4 2,289,348 - -0.3 2,289,386 + +0.8 2,289,386 + +0.9 2,289,386 + +0.2 2,289,387 - +0.1 2,289,387 - +0.3 2,289,411 - -0.4 2,289,411 - +1.3 2,289,569 + Ga0059261_2177 0.21 -0.8 2,289,569 + Ga0059261_2177 0.21 -0.4 2,289,569 + Ga0059261_2177 0.21 +0.6 2,289,569 + Ga0059261_2177 0.21 -0.9 2,289,569 + Ga0059261_2177 0.21 -0.8 2,289,570 - Ga0059261_2177 0.21 +0.3 2,289,570 - Ga0059261_2177 0.21 -0.1 2,289,570 - Ga0059261_2177 0.21 -0.3 2,289,587 + Ga0059261_2177 0.23 +0.0 2,289,587 + Ga0059261_2177 0.23 +0.5 2,289,587 + Ga0059261_2177 0.23 -0.8 2,289,587 + Ga0059261_2177 0.23 -0.1 2,289,588 - Ga0059261_2177 0.23 +0.3 2,289,588 - Ga0059261_2177 0.23 +0.4 2,289,588 - Ga0059261_2177 0.23 -0.1 2,289,875 + Ga0059261_2177 0.45 -0.3 2,289,875 + Ga0059261_2177 0.45 +0.3 2,289,876 - +1.6 2,289,876 - Ga0059261_2177 0.45 -0.5 2,289,876 - Ga0059261_2177 0.45 +0.1 2,289,950 + Ga0059261_2177 0.50 -0.2 2,289,950 + Ga0059261_2177 0.50 -0.2 2,289,950 + Ga0059261_2177 0.50 -0.1 2,289,950 + Ga0059261_2177 0.50 -0.2 2,289,950 + Ga0059261_2177 0.50 -1.0 2,289,950 + Ga0059261_2177 0.50 -0.4 2,289,950 + Ga0059261_2177 0.50 +0.1 2,289,951 - Ga0059261_2177 0.50 -0.9 2,289,951 - Ga0059261_2177 0.50 -0.5 2,289,951 - Ga0059261_2177 0.50 -1.4 2,289,959 - Ga0059261_2177 0.51 +0.6 2,290,033 + Ga0059261_2177 0.57 -1.0 2,290,033 + Ga0059261_2177 0.57 +0.3 2,290,033 + Ga0059261_2177 0.57 +0.4 2,290,033 + Ga0059261_2177 0.57 +0.7 2,290,034 - Ga0059261_2177 0.57 +0.1 2,290,034 - Ga0059261_2177 0.57 +0.2 2,290,034 - Ga0059261_2177 0.57 -0.6 2,290,109 + Ga0059261_2177 0.63 +0.8 2,290,110 - Ga0059261_2177 0.63 +0.2 2,290,110 - Ga0059261_2177 0.63 -0.2 2,290,110 - Ga0059261_2177 0.63 +0.3 2,290,253 + Ga0059261_2177 0.74 -0.9 2,290,253 + Ga0059261_2177 0.74 -1.1 2,290,253 + Ga0059261_2177 0.74 -1.1 2,290,254 - Ga0059261_2177 0.74 -0.6 2,290,254 - Ga0059261_2177 0.74 -0.0
Or see this region's nucleotide sequence