Experiment: Casamino Acids (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS06155 and ABZR86_RS06160 are separated by 7 nucleotides ABZR86_RS06160 and ABZR86_RS06165 are separated by 217 nucleotides ABZR86_RS06165 and ABZR86_RS06170 are separated by 399 nucleotides
ABZR86_RS06155: ABZR86_RS06155 - aminodeoxychorismate synthase component I, at 1,380,256 to 1,381,605
_RS06155
ABZR86_RS06160: ABZR86_RS06160 - beta-ketoacyl-ACP synthase II, at 1,381,613 to 1,382,851
_RS06160
ABZR86_RS06165: ABZR86_RS06165 - acyl carrier protein, at 1,383,069 to 1,383,308
_RS06165
ABZR86_RS06170: ABZR86_RS06170 - 3-oxoacyl-ACP reductase FabG, at 1,383,708 to 1,384,451
_RS06170
Position (kb)
1381
1382
1383 Strain fitness (log2 ratio)
-2
-1
0
1 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.932 kb on + strand, within ABZR86_RS06155 at 1381.003 kb on - strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.293 kb on - strand, within ABZR86_RS06155 at 1381.293 kb on - strand, within ABZR86_RS06155 at 1382.934 kb on - strand at 1382.934 kb on - strand at 1382.956 kb on + strand at 1382.956 kb on + strand at 1382.964 kb on - strand at 1383.350 kb on - strand at 1383.350 kb on - strand at 1383.581 kb on + strand at 1383.581 kb on + strand at 1383.709 kb on + strand at 1383.709 kb on + strand at 1383.719 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Casamino Acids (N) remove 1,380,623 + ABZR86_RS06155 0.27 +0.0 1,380,623 + ABZR86_RS06155 0.27 -1.5 1,380,623 + ABZR86_RS06155 0.27 -1.0 1,380,623 + ABZR86_RS06155 0.27 +0.5 1,380,623 + ABZR86_RS06155 0.27 -0.0 1,380,623 + ABZR86_RS06155 0.27 -0.2 1,380,623 + ABZR86_RS06155 0.27 +0.3 1,380,624 - ABZR86_RS06155 0.27 +0.2 1,380,624 - ABZR86_RS06155 0.27 +0.6 1,380,624 - ABZR86_RS06155 0.27 +0.0 1,380,624 - ABZR86_RS06155 0.27 -0.1 1,380,624 - ABZR86_RS06155 0.27 -0.3 1,380,624 - ABZR86_RS06155 0.27 +0.8 1,380,624 - ABZR86_RS06155 0.27 -0.3 1,380,624 - ABZR86_RS06155 0.27 +0.0 1,380,624 - ABZR86_RS06155 0.27 -0.5 1,380,932 + ABZR86_RS06155 0.50 +0.5 1,381,003 - ABZR86_RS06155 0.55 -2.4 1,381,292 + ABZR86_RS06155 0.77 -0.6 1,381,292 + ABZR86_RS06155 0.77 -0.3 1,381,292 + ABZR86_RS06155 0.77 -0.4 1,381,292 + ABZR86_RS06155 0.77 -0.7 1,381,293 - ABZR86_RS06155 0.77 +0.7 1,381,293 - ABZR86_RS06155 0.77 +0.3 1,382,934 - +0.0 1,382,934 - +0.2 1,382,956 + -1.0 1,382,956 + -0.9 1,382,964 - +0.0 1,383,350 - -0.7 1,383,350 - +0.6 1,383,581 + -0.4 1,383,581 + +0.1 1,383,709 + +0.3 1,383,709 + +1.0 1,383,719 - +1.1
Or see this region's nucleotide sequence