Strain Fitness in Shewanella loihica PV-4 around Shew_1199

Experiment: Chloramphenicol 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 5 mg/ml
1,389,420	+		Shew_1197	0.33	+0.2
1,389,425	+		Shew_1197	0.33	+0.0
1,389,514	-		Shew_1197	0.43	+0.4
1,389,623	-		Shew_1197	0.54	+0.3
1,389,828	+		Shew_1197	0.75	-0.2
1,390,127	+				-0.3
1,390,648	+		Shew_1199	0.47	-0.5
1,390,670	-		Shew_1199	0.51	-2.8
1,390,979	+				-0.6
1,391,031	+				+0.8
1,391,937	+		Shew_1200	0.35	-2.4
1,391,937	+		Shew_1200	0.35	-0.8