Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1571

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,833,077	+		Pf6N2E2_1570	0.21	-2.0
1,833,108	-		Pf6N2E2_1570	0.24	+0.4
1,833,108	-		Pf6N2E2_1570	0.24	+0.7
1,833,164	-		Pf6N2E2_1570	0.29	-0.2
1,833,187	+		Pf6N2E2_1570	0.31	-1.3
1,833,270	+		Pf6N2E2_1570	0.38	-1.2
1,833,308	+		Pf6N2E2_1570	0.41	+0.2
1,833,329	+		Pf6N2E2_1570	0.43	+1.5
1,833,461	+		Pf6N2E2_1570	0.55	-0.3
1,833,462	-		Pf6N2E2_1570	0.55	-0.1
1,833,476	+		Pf6N2E2_1570	0.56	-0.9
1,833,476	+		Pf6N2E2_1570	0.56	-2.1
1,833,477	-		Pf6N2E2_1570	0.56	+0.9
1,833,497	-		Pf6N2E2_1570	0.58	+0.1
1,833,500	+		Pf6N2E2_1570	0.58	-0.4
1,833,512	+		Pf6N2E2_1570	0.59	+1.0
1,833,513	-		Pf6N2E2_1570	0.59	-0.0
1,833,596	-		Pf6N2E2_1570	0.67	-0.8
1,833,596	-		Pf6N2E2_1570	0.67	-2.5
1,833,599	+		Pf6N2E2_1570	0.67	-0.0
1,833,599	+		Pf6N2E2_1570	0.67	-1.7
1,833,599	+		Pf6N2E2_1570	0.67	-0.5
1,833,599	+		Pf6N2E2_1570	0.67	-0.9
1,833,600	-		Pf6N2E2_1570	0.67	-0.1
1,833,600	-		Pf6N2E2_1570	0.67	+0.2
1,833,600	-		Pf6N2E2_1570	0.67	+0.4
1,833,600	-		Pf6N2E2_1570	0.67	-0.7
1,833,714	-		Pf6N2E2_1570	0.77	+0.8
1,833,754	-		Pf6N2E2_1570	0.80	-0.4
1,833,995	-				+0.8
1,834,011	-				-1.1
1,834,015	-				+0.8
1,834,015	-				-0.5
1,834,028	+				+0.8
1,834,029	-				-0.8
1,834,029	-				-2.2
1,834,029	-				-0.9
1,834,068	+				-2.2
1,834,078	-				-3.0
1,834,203	+				-0.2
1,834,204	-				-0.8
1,834,204	-				-0.3
1,834,206	-				-0.5
1,834,206	-				-0.9
1,834,206	-				-0.6
1,834,206	-				-0.4
1,834,206	-				-0.5
1,834,216	+				-1.4
1,834,248	+		Pf6N2E2_1571	0.11	+1.0
1,834,248	+		Pf6N2E2_1571	0.11	+0.6
1,834,248	+		Pf6N2E2_1571	0.11	+0.2
1,834,248	+		Pf6N2E2_1571	0.11	-0.1
1,834,249	-		Pf6N2E2_1571	0.11	-0.7
1,834,249	-		Pf6N2E2_1571	0.11	-0.2
1,834,249	-		Pf6N2E2_1571	0.11	-2.5
1,834,249	-		Pf6N2E2_1571	0.11	+0.5
1,834,249	-		Pf6N2E2_1571	0.11	+0.3
1,834,249	-		Pf6N2E2_1571	0.11	+0.2
1,834,303	-		Pf6N2E2_1571	0.13	-0.1
1,834,303	-		Pf6N2E2_1571	0.13	-0.2
1,834,303	-		Pf6N2E2_1571	0.13	-1.6
1,834,353	+		Pf6N2E2_1571	0.15	-1.9
1,834,354	-		Pf6N2E2_1571	0.15	-2.7
1,834,354	-		Pf6N2E2_1571	0.15	-0.4
1,834,479	+				+1.4
1,834,593	+		Pf6N2E2_1571	0.25	+1.0
1,834,593	+		Pf6N2E2_1571	0.25	-0.6
1,834,593	+		Pf6N2E2_1571	0.25	+0.8
1,834,593	+		Pf6N2E2_1571	0.25	+0.7
1,834,593	+		Pf6N2E2_1571	0.25	-0.8
1,834,593	+		Pf6N2E2_1571	0.25	+0.4
1,834,594	-		Pf6N2E2_1571	0.25	-1.1
1,834,594	-		Pf6N2E2_1571	0.25	-0.7
1,834,594	-		Pf6N2E2_1571	0.25	+0.3
1,834,594	-		Pf6N2E2_1571	0.25	-0.0
1,834,594	-		Pf6N2E2_1571	0.25	+0.1
1,834,731	+		Pf6N2E2_1571	0.31	-0.1
1,834,732	-		Pf6N2E2_1571	0.31	+0.6
1,834,777	-		Pf6N2E2_1571	0.33	+0.3
1,834,777	-		Pf6N2E2_1571	0.33	+0.5
1,834,969	+				+0.6
1,835,033	+		Pf6N2E2_1571	0.44	-1.6
1,835,080	-		Pf6N2E2_1571	0.46	+1.5
1,835,137	-		Pf6N2E2_1571	0.48	-2.1
1,835,200	-		Pf6N2E2_1571	0.51	-0.4
1,835,201	+		Pf6N2E2_1571	0.51	+0.4
1,835,202	-		Pf6N2E2_1571	0.51	-0.6
1,835,202	-		Pf6N2E2_1571	0.51	+0.4
1,835,202	-		Pf6N2E2_1571	0.51	-1.3
1,835,272	+		Pf6N2E2_1571	0.54	-0.8
1,835,273	-		Pf6N2E2_1571	0.54	+1.2
1,835,485	-		Pf6N2E2_1571	0.63	+1.0
1,835,485	-		Pf6N2E2_1571	0.63	-0.8
1,835,485	-		Pf6N2E2_1571	0.63	+0.7
1,835,485	-		Pf6N2E2_1571	0.63	-0.2
1,835,506	-		Pf6N2E2_1571	0.64	+0.4
1,835,622	+		Pf6N2E2_1571	0.69	-0.3
1,835,623	-		Pf6N2E2_1571	0.69	+0.4
1,835,776	-		Pf6N2E2_1571	0.75	+0.8
1,835,823	+		Pf6N2E2_1571	0.77	-2.1
1,835,823	+		Pf6N2E2_1571	0.77	-1.1
1,835,824	-		Pf6N2E2_1571	0.77	+0.0
1,835,824	-		Pf6N2E2_1571	0.77	+1.0
1,835,829	+		Pf6N2E2_1571	0.77	+0.4
1,835,829	+		Pf6N2E2_1571	0.77	-1.0
1,835,829	+		Pf6N2E2_1571	0.77	-3.1
1,835,829	+		Pf6N2E2_1571	0.77	-2.3
1,835,829	+		Pf6N2E2_1571	0.77	-1.7
1,835,830	-		Pf6N2E2_1571	0.77	-2.3
1,835,830	-		Pf6N2E2_1571	0.77	-1.1
1,835,830	-		Pf6N2E2_1571	0.77	-1.3
1,835,830	-		Pf6N2E2_1571	0.77	-0.1
1,835,830	-		Pf6N2E2_1571	0.77	-0.5
1,835,830	-		Pf6N2E2_1571	0.77	-0.8
1,835,830	-		Pf6N2E2_1571	0.77	+2.2
1,835,830	-		Pf6N2E2_1571	0.77	+0.9
1,835,830	-		Pf6N2E2_1571	0.77	-1.2
1,835,830	-		Pf6N2E2_1571	0.77	-0.7
1,835,830	-		Pf6N2E2_1571	0.77	-2.1
1,835,973	+		Pf6N2E2_1571	0.83	-0.5
1,835,974	-		Pf6N2E2_1571	0.83	-0.8
1,835,974	-		Pf6N2E2_1571	0.83	-0.3
1,835,974	-		Pf6N2E2_1571	0.83	-0.2
1,835,974	-		Pf6N2E2_1571	0.83	+0.4
1,836,042	+		Pf6N2E2_1571	0.86	-2.1
1,836,042	+		Pf6N2E2_1571	0.86	-0.9
1,836,042	+		Pf6N2E2_1571	0.86	-0.8
1,836,043	-		Pf6N2E2_1571	0.86	+0.6
1,836,043	-		Pf6N2E2_1571	0.86	-0.1
1,836,058	-		Pf6N2E2_1571	0.87	-0.5
1,836,126	+		Pf6N2E2_1571	0.90	-1.5
1,836,127	-		Pf6N2E2_1571	0.90	+0.1
1,836,127	-		Pf6N2E2_1571	0.90	-0.5
1,836,127	-		Pf6N2E2_1571	0.90	-1.1
1,836,127	-		Pf6N2E2_1571	0.90	-1.4
1,836,127	-		Pf6N2E2_1571	0.90	-2.3
1,836,127	-		Pf6N2E2_1571	0.90	+1.2
1,836,129	+		Pf6N2E2_1571	0.90	+0.5
1,836,129	+		Pf6N2E2_1571	0.90	-0.9
1,836,129	+		Pf6N2E2_1571	0.90	-1.1
1,836,129	+		Pf6N2E2_1571	0.90	+0.1
1,836,130	-		Pf6N2E2_1571	0.90	-2.0
1,836,136	-				-0.5
1,836,153	+				-0.2
1,836,153	+				-3.2
1,836,153	+				+0.1
1,836,154	-				+0.1
1,836,154	-				-0.1
1,836,154	-				-0.4
1,836,534	-				+0.4
1,836,534	-				-0.7
1,836,534	-				-0.4
1,836,593	-				-2.4
1,836,613	-		Pf6N2E2_1572	0.11	+0.8
1,836,722	-		Pf6N2E2_1572	0.23	+0.3
1,836,740	-		Pf6N2E2_1572	0.25	-1.2
1,836,797	-		Pf6N2E2_1572	0.31	+0.2
1,836,820	+		Pf6N2E2_1572	0.34	+1.2
1,836,820	+		Pf6N2E2_1572	0.34	-3.1
1,836,821	-		Pf6N2E2_1572	0.34	+0.5
1,836,824	-		Pf6N2E2_1572	0.34	-0.1
1,836,835	+		Pf6N2E2_1572	0.36	+1.3
1,836,835	+		Pf6N2E2_1572	0.36	-0.3
1,836,837	+		Pf6N2E2_1572	0.36	-0.4
1,836,838	-		Pf6N2E2_1572	0.36	+1.7
1,836,838	-		Pf6N2E2_1572	0.36	-0.9
1,836,881	-		Pf6N2E2_1572	0.40	+0.6
1,836,890	-		Pf6N2E2_1572	0.41	-1.4
1,836,926	-		Pf6N2E2_1572	0.45	-0.5
1,836,926	-		Pf6N2E2_1572	0.45	-1.5
1,836,926	-		Pf6N2E2_1572	0.45	-1.1
1,836,961	+		Pf6N2E2_1572	0.49	+1.4
1,836,961	+		Pf6N2E2_1572	0.49	+1.2
1,837,265	-		Pf6N2E2_1572	0.82	+0.0