Experiment: sodium fluoride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3506 and Ga0059261_3507 are separated by 85 nucleotides Ga0059261_3507 and Ga0059261_3508 are separated by 39 nucleotides
Ga0059261_3506: Ga0059261_3506 - Predicted permeases, at 3,628,330 to 3,629,529
_3506
Ga0059261_3507: Ga0059261_3507 - His Kinase A (phospho-acceptor) domain/Response regulator receiver domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase/CHASE3 domain, at 3,629,615 to 3,631,579
_3507
Ga0059261_3508: Ga0059261_3508 - 7-keto-8-aminopelargonate synthetase and related enzymes, at 3,631,619 to 3,632,872
_3508
Position (kb)
3629
3630
3631
3632 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3629.511 kb on - strand at 3629.593 kb on - strand at 3629.593 kb on - strand at 3629.593 kb on - strand at 3629.593 kb on - strand at 3629.593 kb on - strand at 3629.600 kb on - strand at 3629.617 kb on - strand at 3629.617 kb on - strand at 3629.712 kb on - strand at 3629.757 kb on + strand at 3629.769 kb on + strand at 3629.769 kb on + strand at 3629.769 kb on + strand at 3629.769 kb on + strand at 3629.769 kb on + strand at 3629.769 kb on + strand at 3629.769 kb on + strand at 3629.769 kb on + strand at 3629.769 kb on + strand at 3629.769 kb on + strand at 3629.770 kb on - strand at 3629.770 kb on - strand at 3629.770 kb on - strand at 3630.100 kb on + strand, within Ga0059261_3507 at 3630.100 kb on + strand, within Ga0059261_3507 at 3630.100 kb on + strand, within Ga0059261_3507 at 3630.285 kb on + strand, within Ga0059261_3507 at 3630.285 kb on + strand, within Ga0059261_3507 at 3630.285 kb on + strand, within Ga0059261_3507 at 3630.285 kb on + strand, within Ga0059261_3507 at 3630.285 kb on + strand, within Ga0059261_3507 at 3630.285 kb on + strand, within Ga0059261_3507 at 3630.285 kb on + strand, within Ga0059261_3507 at 3630.285 kb on + strand, within Ga0059261_3507 at 3630.286 kb on - strand, within Ga0059261_3507 at 3630.286 kb on - strand, within Ga0059261_3507 at 3630.286 kb on - strand, within Ga0059261_3507 at 3630.286 kb on - strand, within Ga0059261_3507 at 3630.286 kb on - strand, within Ga0059261_3507 at 3630.340 kb on + strand, within Ga0059261_3507 at 3630.341 kb on - strand, within Ga0059261_3507 at 3630.341 kb on - strand, within Ga0059261_3507 at 3630.341 kb on - strand, within Ga0059261_3507 at 3630.709 kb on + strand, within Ga0059261_3507 at 3630.709 kb on + strand, within Ga0059261_3507 at 3630.709 kb on + strand, within Ga0059261_3507 at 3630.709 kb on + strand, within Ga0059261_3507 at 3630.709 kb on + strand, within Ga0059261_3507 at 3630.710 kb on - strand, within Ga0059261_3507 at 3630.710 kb on - strand, within Ga0059261_3507 at 3630.710 kb on - strand, within Ga0059261_3507 at 3630.710 kb on - strand, within Ga0059261_3507 at 3630.710 kb on - strand, within Ga0059261_3507 at 3630.710 kb on - strand, within Ga0059261_3507 at 3630.710 kb on - strand, within Ga0059261_3507 at 3630.710 kb on - strand, within Ga0059261_3507 at 3630.710 kb on - strand, within Ga0059261_3507 at 3630.710 kb on - strand, within Ga0059261_3507 at 3630.710 kb on - strand, within Ga0059261_3507 at 3631.131 kb on + strand, within Ga0059261_3507 at 3631.131 kb on + strand, within Ga0059261_3507 at 3631.131 kb on + strand, within Ga0059261_3507 at 3631.131 kb on + strand, within Ga0059261_3507 at 3631.131 kb on + strand, within Ga0059261_3507 at 3631.132 kb on - strand, within Ga0059261_3507 at 3631.132 kb on - strand, within Ga0059261_3507 at 3631.132 kb on - strand, within Ga0059261_3507 at 3631.132 kb on - strand, within Ga0059261_3507 at 3631.305 kb on + strand, within Ga0059261_3507 at 3631.305 kb on + strand, within Ga0059261_3507 at 3631.305 kb on + strand, within Ga0059261_3507 at 3631.305 kb on + strand, within Ga0059261_3507 at 3631.305 kb on + strand, within Ga0059261_3507 at 3631.306 kb on - strand, within Ga0059261_3507 at 3631.306 kb on - strand, within Ga0059261_3507 at 3631.306 kb on - strand, within Ga0059261_3507 at 3631.306 kb on - strand, within Ga0059261_3507 at 3631.306 kb on - strand, within Ga0059261_3507 at 3631.341 kb on + strand at 3631.342 kb on - strand, within Ga0059261_3507 at 3631.342 kb on - strand, within Ga0059261_3507 at 3631.342 kb on - strand, within Ga0059261_3507 at 3631.342 kb on - strand, within Ga0059261_3507 at 3631.342 kb on - strand, within Ga0059261_3507 at 3631.410 kb on + strand at 3631.410 kb on + strand at 3631.411 kb on - strand at 3631.411 kb on - strand at 3631.411 kb on - strand at 3631.411 kb on - strand at 3631.411 kb on - strand at 3631.411 kb on - strand at 3631.567 kb on + strand at 3631.591 kb on + strand at 3631.591 kb on + strand at 3631.591 kb on + strand at 3631.592 kb on - strand at 3631.592 kb on - strand at 3631.592 kb on - strand at 3631.592 kb on - strand at 3631.620 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 10 mM remove 3,629,511 - -0.2 3,629,593 - +0.0 3,629,593 - +1.0 3,629,593 - +0.3 3,629,593 - -2.0 3,629,593 - -0.7 3,629,600 - +1.4 3,629,617 - -0.8 3,629,617 - -0.2 3,629,712 - +0.8 3,629,757 + +0.4 3,629,769 + +1.5 3,629,769 + -0.6 3,629,769 + +1.0 3,629,769 + +0.7 3,629,769 + +0.1 3,629,769 + +0.2 3,629,769 + +1.0 3,629,769 + +0.8 3,629,769 + +0.4 3,629,769 + +0.1 3,629,770 - -0.4 3,629,770 - +0.5 3,629,770 - +0.1 3,630,100 + Ga0059261_3507 0.25 -0.1 3,630,100 + Ga0059261_3507 0.25 +0.2 3,630,100 + Ga0059261_3507 0.25 +1.0 3,630,285 + Ga0059261_3507 0.34 +1.5 3,630,285 + Ga0059261_3507 0.34 +0.4 3,630,285 + Ga0059261_3507 0.34 -1.7 3,630,285 + Ga0059261_3507 0.34 +0.4 3,630,285 + Ga0059261_3507 0.34 +0.2 3,630,285 + Ga0059261_3507 0.34 -0.2 3,630,285 + Ga0059261_3507 0.34 +0.7 3,630,285 + Ga0059261_3507 0.34 +0.8 3,630,286 - Ga0059261_3507 0.34 +0.7 3,630,286 - Ga0059261_3507 0.34 +0.3 3,630,286 - Ga0059261_3507 0.34 +0.7 3,630,286 - Ga0059261_3507 0.34 +0.8 3,630,286 - Ga0059261_3507 0.34 +0.8 3,630,340 + Ga0059261_3507 0.37 +0.9 3,630,341 - Ga0059261_3507 0.37 +0.8 3,630,341 - Ga0059261_3507 0.37 +0.2 3,630,341 - Ga0059261_3507 0.37 -0.2 3,630,709 + Ga0059261_3507 0.56 +0.4 3,630,709 + Ga0059261_3507 0.56 +0.0 3,630,709 + Ga0059261_3507 0.56 -0.1 3,630,709 + Ga0059261_3507 0.56 -0.4 3,630,709 + Ga0059261_3507 0.56 +0.7 3,630,710 - Ga0059261_3507 0.56 +0.6 3,630,710 - Ga0059261_3507 0.56 +0.5 3,630,710 - Ga0059261_3507 0.56 +1.2 3,630,710 - Ga0059261_3507 0.56 -0.0 3,630,710 - Ga0059261_3507 0.56 +0.3 3,630,710 - Ga0059261_3507 0.56 +0.3 3,630,710 - Ga0059261_3507 0.56 +1.1 3,630,710 - Ga0059261_3507 0.56 +0.2 3,630,710 - Ga0059261_3507 0.56 +0.1 3,630,710 - Ga0059261_3507 0.56 +0.6 3,630,710 - Ga0059261_3507 0.56 +0.3 3,631,131 + Ga0059261_3507 0.77 +0.2 3,631,131 + Ga0059261_3507 0.77 +1.3 3,631,131 + Ga0059261_3507 0.77 +0.9 3,631,131 + Ga0059261_3507 0.77 +0.4 3,631,131 + Ga0059261_3507 0.77 +0.2 3,631,132 - Ga0059261_3507 0.77 -1.4 3,631,132 - Ga0059261_3507 0.77 +0.5 3,631,132 - Ga0059261_3507 0.77 -0.2 3,631,132 - Ga0059261_3507 0.77 +1.5 3,631,305 + Ga0059261_3507 0.86 +0.5 3,631,305 + Ga0059261_3507 0.86 +2.7 3,631,305 + Ga0059261_3507 0.86 +0.6 3,631,305 + Ga0059261_3507 0.86 +0.3 3,631,305 + Ga0059261_3507 0.86 +0.0 3,631,306 - Ga0059261_3507 0.86 +1.0 3,631,306 - Ga0059261_3507 0.86 +0.6 3,631,306 - Ga0059261_3507 0.86 +0.6 3,631,306 - Ga0059261_3507 0.86 +0.8 3,631,306 - Ga0059261_3507 0.86 +0.6 3,631,341 + +0.8 3,631,342 - Ga0059261_3507 0.88 +0.0 3,631,342 - Ga0059261_3507 0.88 +0.8 3,631,342 - Ga0059261_3507 0.88 +0.7 3,631,342 - Ga0059261_3507 0.88 -0.1 3,631,342 - Ga0059261_3507 0.88 +0.2 3,631,410 + +0.4 3,631,410 + +0.4 3,631,411 - +0.2 3,631,411 - +0.6 3,631,411 - +0.9 3,631,411 - +1.5 3,631,411 - +0.4 3,631,411 - +0.9 3,631,567 + +0.7 3,631,591 + -0.5 3,631,591 + +0.3 3,631,591 + -0.0 3,631,592 - -0.5 3,631,592 - -0.5 3,631,592 - -0.1 3,631,592 - +0.7 3,631,620 + -1.0
Or see this region's nucleotide sequence