Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3332

Experiment: sodium fluoride 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium fluoride 10 mM
3,462,255	+		Ga0059261_3331	0.30	-1.5
3,462,255	+		Ga0059261_3331	0.30	-0.0
3,462,256	-		Ga0059261_3331	0.30	+0.8
3,462,256	-		Ga0059261_3331	0.30	-0.0
3,462,256	-		Ga0059261_3331	0.30	-0.3
3,462,256	-		Ga0059261_3331	0.30	-1.3
3,462,282	+		Ga0059261_3331	0.32	+0.2
3,462,282	+		Ga0059261_3331	0.32	+1.1
3,462,283	-		Ga0059261_3331	0.33	-0.1
3,462,283	-		Ga0059261_3331	0.33	-0.4
3,462,283	-		Ga0059261_3331	0.33	-0.1
3,462,283	-		Ga0059261_3331	0.33	-1.3
3,462,573	+		Ga0059261_3331	0.57	+0.9
3,462,573	+		Ga0059261_3331	0.57	-0.6
3,462,573	+		Ga0059261_3331	0.57	-0.1
3,462,574	-		Ga0059261_3331	0.57	+0.1
3,462,609	+		Ga0059261_3331	0.60	-1.0
3,462,611	+		Ga0059261_3331	0.60	+0.1
3,462,611	+		Ga0059261_3331	0.60	+0.0
3,462,611	+		Ga0059261_3331	0.60	-0.5
3,462,612	-		Ga0059261_3331	0.60	-0.5
3,462,625	-		Ga0059261_3331	0.61	-0.1
3,462,706	+		Ga0059261_3331	0.68	-0.3
3,462,707	-		Ga0059261_3331	0.68	-0.1
3,462,945	+		Ga0059261_3331	0.88	+0.5
3,462,945	+		Ga0059261_3331	0.88	-0.4
3,462,945	+		Ga0059261_3331	0.88	-0.2
3,462,945	+		Ga0059261_3331	0.88	-0.1
3,462,946	-		Ga0059261_3331	0.89	-0.7
3,462,946	-		Ga0059261_3331	0.89	+0.1
3,462,946	-		Ga0059261_3331	0.89	-0.7
3,462,946	-		Ga0059261_3331	0.89	-0.1
3,462,969	+				-0.7
3,462,969	+				-1.3
3,462,970	-				-0.5
3,462,970	-				-0.6
3,462,970	-				+0.3
3,462,970	-				-0.0
3,462,970	-				-0.4
3,462,970	-				-0.1
3,462,972	+				-0.4
3,462,972	+				-0.4
3,462,972	+				+0.7
3,462,972	+				+0.9
3,462,972	+				-0.0
3,462,972	+				-0.1
3,462,972	+				-0.5
3,462,972	+				-0.7
3,462,972	+				-1.4
3,462,972	+				+0.2
3,462,973	-				-1.0
3,462,973	-				-0.7
3,462,973	-				-0.4
3,462,973	-				+0.5
3,462,973	-				+0.7
3,462,973	-				+0.6
3,462,973	-				+0.2
3,462,973	-				+0.4
3,462,973	-				+0.8
3,462,973	-				-0.3
3,463,022	-				-0.4
3,463,090	+				-0.1
3,463,090	+				-0.4
3,463,091	-				+0.4
3,463,091	-				-1.1
3,463,091	-				+0.6
3,463,210	-		Ga0059261_3332	0.10	-0.2
3,463,210	-		Ga0059261_3332	0.10	+0.4
3,463,546	-		Ga0059261_3332	0.49	-1.9
3,463,818	+		Ga0059261_3332	0.81	+0.5
3,463,818	+		Ga0059261_3332	0.81	+0.0
3,463,818	+		Ga0059261_3332	0.81	+0.4
3,463,818	+		Ga0059261_3332	0.81	+0.1
3,463,818	+		Ga0059261_3332	0.81	-0.4
3,463,818	+		Ga0059261_3332	0.81	-0.5
3,463,818	+		Ga0059261_3332	0.81	+2.1
3,463,819	-		Ga0059261_3332	0.81	+0.7
3,463,819	-		Ga0059261_3332	0.81	+0.7
3,463,819	-		Ga0059261_3332	0.81	-1.1
3,463,875	+		Ga0059261_3332	0.87	-0.6
3,463,875	+		Ga0059261_3332	0.87	+1.0
3,463,876	-		Ga0059261_3332	0.87	+0.4
3,463,911	+				-1.3
3,463,912	-				+0.1
3,463,917	+				+0.3
3,463,918	-				-0.1
3,463,918	-				-0.5
3,463,918	-				+0.3
3,463,918	-				-0.3
3,463,918	-				+0.4
3,464,040	+				+0.3
3,464,041	-				+0.1
3,464,041	-				+0.6
3,464,041	-				+0.5
3,464,254	+		Ga0059261_3333	0.45	-0.5
3,464,332	+		Ga0059261_3333	0.62	+1.1
3,464,332	+		Ga0059261_3333	0.62	+0.0
3,464,364	-		Ga0059261_3333	0.69	+0.4
3,464,432	+		Ga0059261_3333	0.83	+0.0
3,464,432	+		Ga0059261_3333	0.83	+0.7
3,464,432	+		Ga0059261_3333	0.83	+0.9
3,464,433	-		Ga0059261_3333	0.83	-0.5
3,464,433	-		Ga0059261_3333	0.83	+0.5
3,464,433	-		Ga0059261_3333	0.83	+0.2
3,464,433	-		Ga0059261_3333	0.83	+0.1
3,464,433	-		Ga0059261_3333	0.83	+0.0
3,464,433	-		Ga0059261_3333	0.83	-0.2
3,464,433	-		Ga0059261_3333	0.83	-0.3
3,464,433	-		Ga0059261_3333	0.83	+0.8
3,464,434	+		Ga0059261_3333	0.83	-0.4
3,464,434	+		Ga0059261_3333	0.83	-0.6
3,464,434	+		Ga0059261_3333	0.83	+0.1
3,464,434	+		Ga0059261_3333	0.83	+1.0
3,464,434	+		Ga0059261_3333	0.83	-0.1
3,464,434	+		Ga0059261_3333	0.83	+0.8
3,464,434	+		Ga0059261_3333	0.83	+0.6
3,464,434	+		Ga0059261_3333	0.83	-0.1
3,464,434	+		Ga0059261_3333	0.83	+0.2
3,464,435	-		Ga0059261_3333	0.83	-0.1
3,464,435	-		Ga0059261_3333	0.83	+0.1
3,464,435	-		Ga0059261_3333	0.83	-0.8
3,464,435	-		Ga0059261_3333	0.83	-0.7
3,464,435	-		Ga0059261_3333	0.83	+0.4
3,464,435	-		Ga0059261_3333	0.83	+0.4
3,464,435	-		Ga0059261_3333	0.83	-0.4
3,464,435	-		Ga0059261_3333	0.83	-0.9
3,464,435	-		Ga0059261_3333	0.83	-0.9
3,464,437	+		Ga0059261_3333	0.84	+1.7
3,464,437	+		Ga0059261_3333	0.84	+0.6
3,464,456	+		Ga0059261_3333	0.88	+0.7
3,464,457	-		Ga0059261_3333	0.88	+0.4
3,464,457	-		Ga0059261_3333	0.88	-0.4
3,464,637	+				-0.2
3,464,638	-				+0.2
3,464,638	-				-0.4
3,464,638	-				-0.3
3,464,706	+		Ga0059261_3334	0.13	-0.3
3,464,707	-		Ga0059261_3334	0.13	-0.7
3,464,733	+		Ga0059261_3334	0.15	-0.7
3,464,734	-		Ga0059261_3334	0.15	-0.5
3,464,910	+		Ga0059261_3334	0.26	-0.5
3,464,910	+		Ga0059261_3334	0.26	+0.9
3,464,911	-		Ga0059261_3334	0.26	-0.5
3,464,911	-		Ga0059261_3334	0.26	-0.5
3,464,911	-		Ga0059261_3334	0.26	-0.2
3,464,913	+		Ga0059261_3334	0.26	-0.7
3,464,913	+		Ga0059261_3334	0.26	+0.4
3,464,913	+		Ga0059261_3334	0.26	+1.3
3,464,913	+		Ga0059261_3334	0.26	-0.3
3,464,913	+		Ga0059261_3334	0.26	-1.2
3,464,913	+		Ga0059261_3334	0.26	-0.4
3,464,913	+		Ga0059261_3334	0.26	-1.6
3,464,913	+		Ga0059261_3334	0.26	+0.1
3,464,913	+		Ga0059261_3334	0.26	+0.7
3,464,913	+		Ga0059261_3334	0.26	+0.4
3,464,913	+		Ga0059261_3334	0.26	+0.3
3,464,913	+		Ga0059261_3334	0.26	-0.9
3,464,913	+		Ga0059261_3334	0.26	+0.2
3,464,913	+		Ga0059261_3334	0.26	+0.5
3,464,913	+		Ga0059261_3334	0.26	+0.5
3,464,913	+		Ga0059261_3334	0.26	-0.2
3,464,913	+		Ga0059261_3334	0.26	-0.5
3,464,913	+		Ga0059261_3334	0.26	+0.2
3,464,913	+		Ga0059261_3334	0.26	+0.0
3,464,913	+		Ga0059261_3334	0.26	-0.2
3,464,913	+		Ga0059261_3334	0.26	-0.3
3,464,914	-		Ga0059261_3334	0.27	+1.5
3,464,914	-		Ga0059261_3334	0.27	-0.3
3,464,914	-				+1.5
3,464,914	-		Ga0059261_3334	0.27	-0.2
3,464,914	-				-1.5
3,464,914	-		Ga0059261_3334	0.27	+0.6
3,464,914	-		Ga0059261_3334	0.27	+0.3
3,464,914	-		Ga0059261_3334	0.27	-0.5
3,464,914	-		Ga0059261_3334	0.27	-0.1
3,464,914	-		Ga0059261_3334	0.27	-0.9
3,464,914	-		Ga0059261_3334	0.27	-0.8
3,464,914	-		Ga0059261_3334	0.27	-1.5