Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2523

Experiment: sodium fluoride 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium fluoride 10 mM
2,613,332	+		Ga0059261_2521	0.62	+0.7
2,613,332	+		Ga0059261_2521	0.62	-0.5
2,613,333	-		Ga0059261_2521	0.62	-0.5
2,613,368	+		Ga0059261_2521	0.69	+0.7
2,613,368	+		Ga0059261_2521	0.69	-0.4
2,613,368	+		Ga0059261_2521	0.69	+0.8
2,613,368	+		Ga0059261_2521	0.69	-0.4
2,613,368	+		Ga0059261_2521	0.69	+0.1
2,613,368	+		Ga0059261_2521	0.69	-0.0
2,613,369	-		Ga0059261_2521	0.69	+0.3
2,613,369	-		Ga0059261_2521	0.69	-0.9
2,613,369	-		Ga0059261_2521	0.69	-0.2
2,613,443	+				+0.1
2,613,444	-		Ga0059261_2521	0.82	+0.1
2,613,444	-		Ga0059261_2521	0.82	-0.3
2,613,444	-		Ga0059261_2521	0.82	+0.0
2,613,444	-		Ga0059261_2521	0.82	+0.6
2,613,444	-		Ga0059261_2521	0.82	+0.5
2,613,444	-		Ga0059261_2521	0.82	+0.7
2,613,444	-		Ga0059261_2521	0.82	-1.5
2,613,444	-		Ga0059261_2521	0.82	+1.3
2,613,444	-		Ga0059261_2521	0.82	-0.5
2,613,446	+		Ga0059261_2521	0.83	+0.1
2,613,446	+		Ga0059261_2521	0.83	-0.1
2,613,446	+		Ga0059261_2521	0.83	-1.3
2,613,446	+		Ga0059261_2521	0.83	-1.1
2,613,446	+		Ga0059261_2521	0.83	+0.7
2,613,446	+		Ga0059261_2521	0.83	-0.3
2,613,446	+		Ga0059261_2521	0.83	-0.5
2,613,446	+		Ga0059261_2521	0.83	-0.6
2,613,446	+		Ga0059261_2521	0.83	-0.2
2,613,446	+		Ga0059261_2521	0.83	+0.1
2,613,446	+		Ga0059261_2521	0.83	-0.7
2,613,446	+		Ga0059261_2521	0.83	+0.2
2,613,446	+		Ga0059261_2521	0.83	+0.3
2,613,446	+		Ga0059261_2521	0.83	-0.5
2,613,446	+		Ga0059261_2521	0.83	-0.0
2,613,447	-		Ga0059261_2521	0.83	-0.3
2,613,447	-		Ga0059261_2521	0.83	+0.2
2,613,447	-		Ga0059261_2521	0.83	-0.8
2,613,447	-				+0.3
2,613,447	-		Ga0059261_2521	0.83	+1.1
2,613,447	-		Ga0059261_2521	0.83	-1.0
2,613,447	-		Ga0059261_2521	0.83	+0.0
2,613,447	-		Ga0059261_2521	0.83	-0.2
2,613,447	-		Ga0059261_2521	0.83	-1.0
2,613,447	-		Ga0059261_2521	0.83	-0.2
2,613,447	-		Ga0059261_2521	0.83	-0.2
2,613,447	-		Ga0059261_2521	0.83	-0.6
2,613,447	-		Ga0059261_2521	0.83	+1.5
2,613,447	-		Ga0059261_2521	0.83	-0.1
2,613,447	-		Ga0059261_2521	0.83	-1.0
2,613,644	-				+0.5
2,613,662	+				-0.4
2,613,662	+				-0.0
2,613,662	+				+0.2
2,613,662	+				-1.0
2,613,662	+				+0.6
2,613,662	+				+0.1
2,613,663	-				+0.8
2,613,663	-				+0.3
2,613,721	-				-0.3
2,613,772	+				-2.0
2,613,772	+				-0.5
2,613,772	+				-0.4
2,613,772	+				+0.0
2,613,773	-				+1.0
2,613,773	-				+0.5
2,613,773	-				-0.3
2,613,773	-				+1.1
2,613,924	+				-0.4
2,613,924	+				-1.7
2,613,925	-				-0.0
2,613,925	-				+2.1
2,614,092	+		Ga0059261_2522	0.46	+0.3
2,614,092	+		Ga0059261_2522	0.46	-0.9
2,614,092	+		Ga0059261_2522	0.46	-0.1
2,614,092	+		Ga0059261_2522	0.46	-0.4
2,614,093	-		Ga0059261_2522	0.47	-0.3
2,614,093	-		Ga0059261_2522	0.47	-0.9
2,614,093	-		Ga0059261_2522	0.47	-0.8
2,614,093	-		Ga0059261_2522	0.47	-1.0
2,614,161	+		Ga0059261_2522	0.65	-1.7
2,614,161	+		Ga0059261_2522	0.65	+0.9
2,614,161	+		Ga0059261_2522	0.65	+2.2
2,614,161	+		Ga0059261_2522	0.65	-0.5
2,614,162	-		Ga0059261_2522	0.65	-0.6
2,614,285	+				-0.3
2,614,285	+				-0.2
2,614,285	+				+0.2
2,614,285	+				+0.6
2,614,285	+				-0.1
2,614,285	+				+0.2
2,614,285	+				+0.9
2,614,285	+				-0.9
2,614,285	+				+0.6
2,614,286	-				-0.3
2,614,286	-				-0.4
2,614,286	-				-0.8
2,614,296	+				-0.1
2,614,297	-				-0.9
2,614,297	-				-1.8
2,614,297	-				+0.5
2,614,345	+				+2.7
2,614,451	-		Ga0059261_2523	0.44	-0.5
2,614,470	+		Ga0059261_2523	0.50	-0.5
2,614,470	+		Ga0059261_2523	0.50	-0.0
2,614,470	+		Ga0059261_2523	0.50	-0.4
2,614,470	+		Ga0059261_2523	0.50	-0.1
2,614,470	+				+0.9
2,614,470	+		Ga0059261_2523	0.50	-0.6
2,614,470	+		Ga0059261_2523	0.50	+0.3
2,614,471	-		Ga0059261_2523	0.50	+0.2
2,614,471	-		Ga0059261_2523	0.50	-0.6
2,614,471	-		Ga0059261_2523	0.50	-0.0
2,614,471	-		Ga0059261_2523	0.50	-0.5
2,614,471	-		Ga0059261_2523	0.50	+0.2
2,614,471	-		Ga0059261_2523	0.50	+0.9
2,614,471	-		Ga0059261_2523	0.50	+0.0
2,614,471	-		Ga0059261_2523	0.50	+1.0
2,614,471	-		Ga0059261_2523	0.50	+0.3
2,614,471	-		Ga0059261_2523	0.50	+1.4
2,614,471	-		Ga0059261_2523	0.50	+0.4
2,614,471	-		Ga0059261_2523	0.50	+0.3
2,614,471	-		Ga0059261_2523	0.50	-0.1
2,614,471	-		Ga0059261_2523	0.50	+0.3
2,614,471	-		Ga0059261_2523	0.50	-0.6
2,614,471	-		Ga0059261_2523	0.50	+0.6
2,614,471	-		Ga0059261_2523	0.50	+0.6
2,614,603	+		Ga0059261_2523	0.88	-0.5
2,614,603	+		Ga0059261_2523	0.88	-0.2
2,614,603	+		Ga0059261_2523	0.88	+0.2
2,614,604	-				+1.5
2,614,604	-		Ga0059261_2523	0.88	-0.1
2,614,604	-		Ga0059261_2523	0.88	-0.7
2,614,604	-		Ga0059261_2523	0.88	+1.6
2,614,604	-		Ga0059261_2523	0.88	-0.2
2,614,604	-		Ga0059261_2523	0.88	+0.1
2,614,604	-		Ga0059261_2523	0.88	+0.3
2,614,605	+		Ga0059261_2523	0.88	-0.2
2,614,605	+		Ga0059261_2523	0.88	+0.3
2,614,605	+		Ga0059261_2523	0.88	+0.8
2,614,605	+		Ga0059261_2523	0.88	+1.9
2,614,606	-		Ga0059261_2523	0.89	+0.6
2,614,769	+				+0.5
2,614,769	+				-0.6
2,614,769	+				-1.5
2,614,769	+				-0.2
2,614,769	+				-0.4
2,614,769	+				-0.3
2,614,769	+				+0.5
2,614,769	+				-0.8
2,614,769	+				+0.8
2,614,769	+				-0.7
2,614,770	-				-0.7
2,614,770	-				-0.5
2,614,770	-				-0.2
2,614,770	-				-0.3
2,614,770	-				-0.0
2,614,770	-				-0.3
2,614,770	-				-0.5
2,614,911	-		Ga0059261_2524	0.30	-0.1
2,614,911	-		Ga0059261_2524	0.30	-0.0
2,614,911	-		Ga0059261_2524	0.30	+0.3
2,614,911	-		Ga0059261_2524	0.30	-0.1
2,614,991	+		Ga0059261_2524	0.42	-2.0
2,614,991	+		Ga0059261_2524	0.42	-1.4
2,614,991	+		Ga0059261_2524	0.42	+0.2
2,614,991	+		Ga0059261_2524	0.42	-0.5
2,614,991	+		Ga0059261_2524	0.42	-0.6
2,614,991	+		Ga0059261_2524	0.42	+0.9
2,614,991	+		Ga0059261_2524	0.42	-0.6
2,614,992	-		Ga0059261_2524	0.42	+0.9
2,614,992	-		Ga0059261_2524	0.42	+0.2
2,614,992	-		Ga0059261_2524	0.42	-0.0
2,614,992	-		Ga0059261_2524	0.42	-0.9
2,614,992	-		Ga0059261_2524	0.42	+0.3
2,614,992	-		Ga0059261_2524	0.42	-0.5
2,614,992	-		Ga0059261_2524	0.42	-1.5
2,614,992	-		Ga0059261_2524	0.42	+0.2
2,614,992	-		Ga0059261_2524	0.42	+0.3
2,614,992	-		Ga0059261_2524	0.42	+0.3
2,615,080	+		Ga0059261_2524	0.55	+0.2
2,615,080	+		Ga0059261_2524	0.55	+0.4
2,615,080	+		Ga0059261_2524	0.55	-0.1
2,615,080	+		Ga0059261_2524	0.55	-0.3
2,615,081	-		Ga0059261_2524	0.55	+0.2
2,615,081	-		Ga0059261_2524	0.55	-0.6
2,615,081	-		Ga0059261_2524	0.55	+0.6
2,615,081	-		Ga0059261_2524	0.55	+0.3
2,615,381	-				+1.1
2,615,432	+				-0.9
2,615,432	+				-0.0
2,615,432	+				+0.2
2,615,432	+				-0.4
2,615,432	+				-1.5
2,615,432	+				+0.4
2,615,432	+				+0.9
2,615,432	+				-0.7
2,615,432	+				+0.7
2,615,432	+				+0.5
2,615,432	+				-0.3
2,615,432	+				-1.0
2,615,432	+				-1.0
2,615,432	+				+0.3
2,615,432	+				+0.3
2,615,432	+				+0.2
2,615,433	-				-0.1
2,615,433	-				+0.3
2,615,433	-				+1.0
2,615,433	-				+0.7
2,615,433	-				+0.8
2,615,433	-				-0.4
2,615,433	-				-0.6
2,615,433	-				+1.3
2,615,434	+				+0.5
2,615,437	+				-0.0
2,615,437	+				-0.3
2,615,437	+				-0.8
2,615,437	+				-0.9
2,615,438	-				+1.9
2,615,438	-				+2.9
2,615,438	-				+0.1
2,615,438	-				+0.6
2,615,478	+				+2.5
2,615,478	+				-0.2
2,615,478	+				-0.0
2,615,478	+				+0.6
2,615,478	+				+0.1
2,615,478	+				+0.3
2,615,478	+				-0.4
2,615,479	-				-0.5
2,615,479	-				+0.5
2,615,479	-				-0.8
2,615,479	-				-0.3
2,615,479	-				+0.7
2,615,479	-				-0.0
2,615,479	-				+0.0
2,615,483	+				+0.0
2,615,483	+				+0.4
2,615,483	+				+0.0
2,615,483	+				-0.5
2,615,483	+				+0.1
2,615,483	+				-0.2
2,615,483	+				+0.3
2,615,483	+				+0.6
2,615,483	+				+0.4
2,615,483	+				+0.3
2,615,483	+				-0.0
2,615,483	+				+0.7
2,615,483	+				+0.7
2,615,483	+				+0.2
2,615,483	+				-0.2
2,615,483	+				+0.2
2,615,484	-				+1.1
2,615,484	-				+0.5
2,615,484	-				-1.3
2,615,484	-				-0.3
2,615,484	-				-0.8
2,615,484	-				+0.3
2,615,484	-				+0.5
2,615,484	-				-0.1
2,615,492	-				+0.4