Experiment: sodium fluoride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2394 and Ga0059261_2395 are separated by 4 nucleotides Ga0059261_2395 and Ga0059261_2396 are separated by 324 nucleotides Ga0059261_2396 and Ga0059261_2397 overlap by 8 nucleotides
Ga0059261_2394: Ga0059261_2394 - diaminopimelate epimerase (EC 5.1.1.7), at 2,491,604 to 2,492,551
_2394
Ga0059261_2395: Ga0059261_2395 - hypothetical protein, at 2,492,556 to 2,492,960
_2395
Ga0059261_2396: Ga0059261_2396 - hypothetical protein, at 2,493,285 to 2,493,794
_2396
Ga0059261_2397: Ga0059261_2397 - Uncharacterized conserved protein, at 2,493,787 to 2,495,124
_2397
Position (kb)
2493
2494 Strain fitness (log2 ratio)
-1
0
1 at 2492.557 kb on + strand at 2492.558 kb on - strand at 2492.756 kb on - strand, within Ga0059261_2395 at 2492.779 kb on + strand, within Ga0059261_2395 at 2492.779 kb on + strand, within Ga0059261_2395 at 2492.779 kb on + strand, within Ga0059261_2395 at 2492.779 kb on + strand, within Ga0059261_2395 at 2492.780 kb on - strand, within Ga0059261_2395 at 2492.780 kb on - strand, within Ga0059261_2395 at 2492.780 kb on - strand, within Ga0059261_2395 at 2492.780 kb on - strand, within Ga0059261_2395 at 2492.780 kb on - strand, within Ga0059261_2395 at 2492.806 kb on + strand at 2492.960 kb on + strand at 2492.961 kb on - strand at 2492.980 kb on + strand at 2492.981 kb on - strand at 2493.204 kb on - strand at 2493.274 kb on + strand at 2493.274 kb on + strand at 2493.275 kb on - strand at 2493.275 kb on - strand at 2493.275 kb on - strand at 2493.275 kb on - strand at 2493.510 kb on + strand, within Ga0059261_2396 at 2493.510 kb on + strand, within Ga0059261_2396 at 2493.510 kb on + strand, within Ga0059261_2396 at 2493.511 kb on - strand, within Ga0059261_2396 at 2493.645 kb on + strand, within Ga0059261_2396 at 2493.645 kb on + strand, within Ga0059261_2396 at 2493.645 kb on + strand, within Ga0059261_2396 at 2493.645 kb on + strand, within Ga0059261_2396 at 2493.646 kb on - strand, within Ga0059261_2396 at 2493.646 kb on - strand, within Ga0059261_2396 at 2493.646 kb on - strand, within Ga0059261_2396 at 2493.646 kb on - strand, within Ga0059261_2396 at 2493.646 kb on - strand, within Ga0059261_2396 at 2494.213 kb on + strand, within Ga0059261_2397 at 2494.213 kb on + strand, within Ga0059261_2397 at 2494.213 kb on + strand, within Ga0059261_2397 at 2494.213 kb on + strand, within Ga0059261_2397 at 2494.213 kb on + strand, within Ga0059261_2397 at 2494.213 kb on + strand, within Ga0059261_2397 at 2494.213 kb on + strand, within Ga0059261_2397 at 2494.213 kb on + strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.214 kb on - strand, within Ga0059261_2397 at 2494.219 kb on + strand, within Ga0059261_2397 at 2494.220 kb on - strand, within Ga0059261_2397 at 2494.220 kb on - strand, within Ga0059261_2397 at 2494.498 kb on + strand, within Ga0059261_2397 at 2494.499 kb on - strand, within Ga0059261_2397 at 2494.588 kb on - strand, within Ga0059261_2397
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 10 mM remove 2,492,557 + -0.9 2,492,558 - -0.3 2,492,756 - Ga0059261_2395 0.49 -0.7 2,492,779 + Ga0059261_2395 0.55 -0.2 2,492,779 + Ga0059261_2395 0.55 -0.8 2,492,779 + Ga0059261_2395 0.55 +0.1 2,492,779 + Ga0059261_2395 0.55 -1.1 2,492,780 - Ga0059261_2395 0.55 -0.4 2,492,780 - Ga0059261_2395 0.55 +0.8 2,492,780 - Ga0059261_2395 0.55 +0.6 2,492,780 - Ga0059261_2395 0.55 -0.1 2,492,780 - Ga0059261_2395 0.55 -0.6 2,492,806 + +0.4 2,492,960 + -1.2 2,492,961 - -0.7 2,492,980 + -1.0 2,492,981 - +0.2 2,493,204 - -0.5 2,493,274 + -0.1 2,493,274 + +1.0 2,493,275 - -0.2 2,493,275 - +0.1 2,493,275 - +0.0 2,493,275 - +0.3 2,493,510 + Ga0059261_2396 0.44 -0.0 2,493,510 + Ga0059261_2396 0.44 +0.7 2,493,510 + Ga0059261_2396 0.44 +0.6 2,493,511 - Ga0059261_2396 0.44 +0.6 2,493,645 + Ga0059261_2396 0.71 -0.2 2,493,645 + Ga0059261_2396 0.71 +0.4 2,493,645 + Ga0059261_2396 0.71 +1.6 2,493,645 + Ga0059261_2396 0.71 -1.2 2,493,646 - Ga0059261_2396 0.71 +0.0 2,493,646 - Ga0059261_2396 0.71 +0.2 2,493,646 - Ga0059261_2396 0.71 -0.3 2,493,646 - Ga0059261_2396 0.71 +0.7 2,493,646 - Ga0059261_2396 0.71 +0.3 2,494,213 + Ga0059261_2397 0.32 -0.6 2,494,213 + Ga0059261_2397 0.32 +0.4 2,494,213 + Ga0059261_2397 0.32 -0.4 2,494,213 + Ga0059261_2397 0.32 +0.5 2,494,213 + Ga0059261_2397 0.32 -0.3 2,494,213 + Ga0059261_2397 0.32 -0.2 2,494,213 + Ga0059261_2397 0.32 -0.3 2,494,213 + Ga0059261_2397 0.32 +0.1 2,494,214 - Ga0059261_2397 0.32 -0.1 2,494,214 - Ga0059261_2397 0.32 -0.4 2,494,214 - Ga0059261_2397 0.32 +1.0 2,494,214 - Ga0059261_2397 0.32 -0.1 2,494,214 - Ga0059261_2397 0.32 +0.3 2,494,214 - Ga0059261_2397 0.32 -0.7 2,494,214 - Ga0059261_2397 0.32 -0.3 2,494,214 - -0.0 2,494,214 - Ga0059261_2397 0.32 -0.3 2,494,214 - Ga0059261_2397 0.32 -0.1 2,494,214 - Ga0059261_2397 0.32 -0.6 2,494,214 - Ga0059261_2397 0.32 -0.0 2,494,214 - Ga0059261_2397 0.32 -0.5 2,494,214 - Ga0059261_2397 0.32 +0.6 2,494,219 + Ga0059261_2397 0.32 -0.8 2,494,220 - Ga0059261_2397 0.32 -0.7 2,494,220 - Ga0059261_2397 0.32 +1.0 2,494,498 + Ga0059261_2397 0.53 -0.8 2,494,499 - Ga0059261_2397 0.53 +1.0 2,494,588 - Ga0059261_2397 0.60 +0.2
Or see this region's nucleotide sequence