Experiment: sodium fluoride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2313 and Ga0059261_2314 are separated by 33 nucleotides Ga0059261_2314 and Ga0059261_2315 are separated by 28 nucleotides Ga0059261_2315 and Ga0059261_2316 overlap by 1 nucleotides
Ga0059261_2313: Ga0059261_2313 - condensin subunit Smc, at 2,423,747 to 2,427,154
_2313
Ga0059261_2314: Ga0059261_2314 - Protein-disulfide isomerase, at 2,427,188 to 2,427,922
_2314
Ga0059261_2315: Ga0059261_2315 - Protein-disulfide isomerase, at 2,427,951 to 2,428,661
_2315
Ga0059261_2316: Ga0059261_2316 - Uncharacterized protein conserved in bacteria, at 2,428,661 to 2,429,173
_2316
Position (kb)
2427
2428 Strain fitness (log2 ratio)
-1
0
1
2 at 2426.835 kb on + strand at 2426.835 kb on + strand at 2426.836 kb on - strand at 2426.861 kb on - strand at 2427.157 kb on + strand at 2427.157 kb on + strand at 2427.157 kb on + strand at 2427.157 kb on + strand at 2427.157 kb on + strand at 2427.158 kb on - strand at 2427.158 kb on - strand at 2427.158 kb on - strand at 2427.158 kb on - strand at 2427.158 kb on - strand at 2427.286 kb on + strand, within Ga0059261_2314 at 2427.287 kb on - strand at 2427.287 kb on - strand, within Ga0059261_2314 at 2427.289 kb on + strand, within Ga0059261_2314 at 2427.289 kb on + strand, within Ga0059261_2314 at 2427.289 kb on + strand, within Ga0059261_2314 at 2427.290 kb on - strand, within Ga0059261_2314 at 2427.290 kb on - strand, within Ga0059261_2314 at 2427.290 kb on - strand, within Ga0059261_2314 at 2427.290 kb on - strand, within Ga0059261_2314 at 2427.291 kb on + strand, within Ga0059261_2314 at 2427.291 kb on + strand, within Ga0059261_2314 at 2427.292 kb on - strand, within Ga0059261_2314 at 2427.292 kb on - strand, within Ga0059261_2314 at 2427.292 kb on - strand, within Ga0059261_2314 at 2427.292 kb on - strand at 2427.406 kb on - strand, within Ga0059261_2314 at 2427.406 kb on - strand, within Ga0059261_2314 at 2427.412 kb on - strand, within Ga0059261_2314 at 2427.412 kb on - strand, within Ga0059261_2314 at 2427.523 kb on - strand, within Ga0059261_2314 at 2427.917 kb on - strand at 2427.917 kb on - strand at 2428.265 kb on + strand, within Ga0059261_2315 at 2428.265 kb on + strand, within Ga0059261_2315 at 2428.265 kb on + strand, within Ga0059261_2315 at 2428.265 kb on + strand, within Ga0059261_2315 at 2428.265 kb on + strand, within Ga0059261_2315 at 2428.265 kb on + strand at 2428.266 kb on - strand, within Ga0059261_2315 at 2428.266 kb on - strand, within Ga0059261_2315 at 2428.266 kb on - strand, within Ga0059261_2315 at 2428.266 kb on - strand, within Ga0059261_2315 at 2428.266 kb on - strand, within Ga0059261_2315 at 2428.266 kb on - strand, within Ga0059261_2315 at 2428.414 kb on + strand, within Ga0059261_2315 at 2428.414 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.463 kb on + strand, within Ga0059261_2315 at 2428.464 kb on - strand, within Ga0059261_2315 at 2428.464 kb on - strand, within Ga0059261_2315 at 2428.464 kb on - strand, within Ga0059261_2315 at 2428.464 kb on - strand, within Ga0059261_2315 at 2428.464 kb on - strand, within Ga0059261_2315 at 2428.464 kb on - strand, within Ga0059261_2315 at 2428.464 kb on - strand, within Ga0059261_2315 at 2428.464 kb on - strand, within Ga0059261_2315 at 2428.464 kb on - strand, within Ga0059261_2315 at 2428.464 kb on - strand, within Ga0059261_2315 at 2428.465 kb on + strand, within Ga0059261_2315 at 2428.465 kb on + strand, within Ga0059261_2315 at 2428.465 kb on + strand, within Ga0059261_2315 at 2428.465 kb on + strand, within Ga0059261_2315 at 2428.465 kb on + strand, within Ga0059261_2315 at 2428.466 kb on - strand, within Ga0059261_2315 at 2428.466 kb on - strand, within Ga0059261_2315 at 2428.466 kb on - strand, within Ga0059261_2315 at 2428.466 kb on - strand, within Ga0059261_2315 at 2428.466 kb on - strand, within Ga0059261_2315 at 2428.466 kb on - strand, within Ga0059261_2315 at 2428.466 kb on - strand, within Ga0059261_2315 at 2428.466 kb on - strand, within Ga0059261_2315 at 2428.474 kb on + strand, within Ga0059261_2315 at 2428.474 kb on + strand, within Ga0059261_2315 at 2428.475 kb on - strand, within Ga0059261_2315 at 2428.475 kb on - strand, within Ga0059261_2315 at 2428.475 kb on - strand at 2428.475 kb on - strand, within Ga0059261_2315 at 2428.475 kb on - strand, within Ga0059261_2315 at 2428.648 kb on + strand at 2428.648 kb on + strand at 2428.648 kb on + strand at 2428.648 kb on + strand at 2428.648 kb on + strand at 2428.649 kb on - strand at 2428.649 kb on - strand at 2428.649 kb on - strand at 2428.649 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 10 mM remove 2,426,835 + +0.5 2,426,835 + +0.4 2,426,836 - -0.3 2,426,861 - -1.4 2,427,157 + -0.2 2,427,157 + -0.6 2,427,157 + -0.4 2,427,157 + +0.2 2,427,157 + +0.4 2,427,158 - -1.3 2,427,158 - +0.2 2,427,158 - +1.2 2,427,158 - +0.4 2,427,158 - -0.6 2,427,286 + Ga0059261_2314 0.13 +1.6 2,427,287 - -0.4 2,427,287 - Ga0059261_2314 0.13 +0.6 2,427,289 + Ga0059261_2314 0.14 -0.1 2,427,289 + Ga0059261_2314 0.14 +1.4 2,427,289 + Ga0059261_2314 0.14 +1.8 2,427,290 - Ga0059261_2314 0.14 +1.0 2,427,290 - Ga0059261_2314 0.14 +0.2 2,427,290 - Ga0059261_2314 0.14 +0.7 2,427,290 - Ga0059261_2314 0.14 +1.3 2,427,291 + Ga0059261_2314 0.14 -0.6 2,427,291 + Ga0059261_2314 0.14 +0.2 2,427,292 - Ga0059261_2314 0.14 +1.6 2,427,292 - Ga0059261_2314 0.14 -1.7 2,427,292 - Ga0059261_2314 0.14 -0.7 2,427,292 - -0.0 2,427,406 - Ga0059261_2314 0.30 +1.3 2,427,406 - Ga0059261_2314 0.30 -0.2 2,427,412 - Ga0059261_2314 0.30 +0.5 2,427,412 - Ga0059261_2314 0.30 -0.2 2,427,523 - Ga0059261_2314 0.46 +1.3 2,427,917 - +0.3 2,427,917 - +0.9 2,428,265 + Ga0059261_2315 0.44 +0.0 2,428,265 + Ga0059261_2315 0.44 -0.6 2,428,265 + Ga0059261_2315 0.44 +0.2 2,428,265 + Ga0059261_2315 0.44 +1.4 2,428,265 + Ga0059261_2315 0.44 +0.1 2,428,265 + -0.4 2,428,266 - Ga0059261_2315 0.44 +1.0 2,428,266 - Ga0059261_2315 0.44 -0.3 2,428,266 - Ga0059261_2315 0.44 +0.7 2,428,266 - Ga0059261_2315 0.44 -0.3 2,428,266 - Ga0059261_2315 0.44 -0.4 2,428,266 - Ga0059261_2315 0.44 +0.1 2,428,414 + Ga0059261_2315 0.65 -1.3 2,428,414 + Ga0059261_2315 0.65 -0.5 2,428,463 + Ga0059261_2315 0.72 -0.1 2,428,463 + Ga0059261_2315 0.72 +0.7 2,428,463 + Ga0059261_2315 0.72 -0.7 2,428,463 + Ga0059261_2315 0.72 +1.8 2,428,463 + Ga0059261_2315 0.72 +0.2 2,428,463 + Ga0059261_2315 0.72 -0.9 2,428,463 + Ga0059261_2315 0.72 -0.8 2,428,463 + Ga0059261_2315 0.72 -0.1 2,428,463 + Ga0059261_2315 0.72 +0.8 2,428,463 + Ga0059261_2315 0.72 +1.6 2,428,463 + Ga0059261_2315 0.72 -0.7 2,428,463 + Ga0059261_2315 0.72 -0.3 2,428,464 - Ga0059261_2315 0.72 +0.1 2,428,464 - Ga0059261_2315 0.72 +0.3 2,428,464 - Ga0059261_2315 0.72 -0.1 2,428,464 - Ga0059261_2315 0.72 -0.0 2,428,464 - Ga0059261_2315 0.72 +0.5 2,428,464 - Ga0059261_2315 0.72 +0.1 2,428,464 - Ga0059261_2315 0.72 -0.6 2,428,464 - Ga0059261_2315 0.72 -0.6 2,428,464 - Ga0059261_2315 0.72 -0.1 2,428,464 - Ga0059261_2315 0.72 -0.4 2,428,465 + Ga0059261_2315 0.72 -0.9 2,428,465 + Ga0059261_2315 0.72 +0.9 2,428,465 + Ga0059261_2315 0.72 +0.4 2,428,465 + Ga0059261_2315 0.72 +0.0 2,428,465 + Ga0059261_2315 0.72 +0.4 2,428,466 - Ga0059261_2315 0.72 -0.4 2,428,466 - Ga0059261_2315 0.72 +0.4 2,428,466 - Ga0059261_2315 0.72 +0.3 2,428,466 - Ga0059261_2315 0.72 -0.2 2,428,466 - Ga0059261_2315 0.72 +0.2 2,428,466 - Ga0059261_2315 0.72 +0.1 2,428,466 - Ga0059261_2315 0.72 +0.3 2,428,466 - Ga0059261_2315 0.72 -0.5 2,428,474 + Ga0059261_2315 0.74 +0.1 2,428,474 + Ga0059261_2315 0.74 -0.4 2,428,475 - Ga0059261_2315 0.74 -0.2 2,428,475 - Ga0059261_2315 0.74 +0.5 2,428,475 - +1.0 2,428,475 - Ga0059261_2315 0.74 +0.2 2,428,475 - Ga0059261_2315 0.74 -0.6 2,428,648 + +0.8 2,428,648 + -1.0 2,428,648 + -1.0 2,428,648 + -0.6 2,428,648 + +0.8 2,428,649 - +0.4 2,428,649 - -0.1 2,428,649 - -0.6 2,428,649 - +0.3
Or see this region's nucleotide sequence