Experiment: sodium fluoride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2221 and Ga0059261_2222 are separated by 138 nucleotides Ga0059261_2222 and Ga0059261_2223 are separated by 259 nucleotides
Ga0059261_2221: Ga0059261_2221 - Outer membrane lipoprotein-sorting protein, at 2,324,454 to 2,325,086
_2221
Ga0059261_2222: Ga0059261_2222 - Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family, at 2,325,225 to 2,325,683
_2222
Ga0059261_2223: Ga0059261_2223 - Mg2+ transporter (mgtE), at 2,325,943 to 2,327,340
_2223
Position (kb)
2325
2326 Strain fitness (log2 ratio)
-1
0
1 at 2324.275 kb on + strand at 2324.276 kb on - strand at 2324.276 kb on - strand at 2324.276 kb on - strand at 2324.276 kb on - strand at 2324.351 kb on + strand at 2324.351 kb on + strand at 2324.351 kb on + strand at 2324.351 kb on + strand at 2324.352 kb on - strand at 2324.352 kb on - strand at 2324.352 kb on - strand at 2324.352 kb on - strand at 2324.352 kb on - strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.397 kb on + strand at 2324.398 kb on + strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.398 kb on - strand at 2324.412 kb on + strand at 2324.413 kb on - strand at 2325.087 kb on - strand at 2325.127 kb on + strand at 2325.128 kb on - strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.170 kb on + strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.171 kb on - strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.175 kb on + strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.176 kb on - strand at 2325.334 kb on + strand, within Ga0059261_2222 at 2325.334 kb on + strand, within Ga0059261_2222 at 2325.334 kb on + strand, within Ga0059261_2222 at 2325.334 kb on + strand, within Ga0059261_2222 at 2325.334 kb on + strand, within Ga0059261_2222 at 2325.334 kb on + strand, within Ga0059261_2222 at 2325.334 kb on + strand, within Ga0059261_2222 at 2325.335 kb on - strand, within Ga0059261_2222 at 2325.335 kb on - strand, within Ga0059261_2222 at 2325.335 kb on - strand, within Ga0059261_2222 at 2325.335 kb on - strand, within Ga0059261_2222 at 2325.559 kb on + strand, within Ga0059261_2222 at 2325.559 kb on + strand, within Ga0059261_2222 at 2325.559 kb on + strand, within Ga0059261_2222 at 2325.559 kb on + strand at 2325.559 kb on + strand, within Ga0059261_2222 at 2325.559 kb on + strand, within Ga0059261_2222 at 2325.560 kb on - strand, within Ga0059261_2222 at 2325.560 kb on - strand, within Ga0059261_2222 at 2325.560 kb on - strand, within Ga0059261_2222 at 2325.560 kb on - strand, within Ga0059261_2222 at 2325.560 kb on - strand, within Ga0059261_2222 at 2325.560 kb on - strand, within Ga0059261_2222 at 2325.560 kb on - strand, within Ga0059261_2222 at 2325.560 kb on - strand, within Ga0059261_2222 at 2325.704 kb on + strand at 2325.724 kb on + strand at 2325.724 kb on + strand at 2325.724 kb on + strand at 2325.724 kb on + strand at 2325.724 kb on + strand at 2325.724 kb on + strand at 2325.724 kb on + strand at 2325.724 kb on + strand at 2325.725 kb on - strand at 2325.725 kb on - strand at 2325.725 kb on - strand at 2325.725 kb on - strand at 2325.725 kb on - strand at 2325.725 kb on - strand at 2325.725 kb on - strand at 2325.725 kb on - strand at 2325.725 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 10 mM remove 2,324,275 + -0.4 2,324,276 - +0.1 2,324,276 - +0.6 2,324,276 - -0.0 2,324,276 - +0.6 2,324,351 + -0.2 2,324,351 + -0.2 2,324,351 + +0.8 2,324,351 + +0.3 2,324,352 - +0.1 2,324,352 - +0.3 2,324,352 - -0.8 2,324,352 - -0.4 2,324,352 - -0.3 2,324,397 + +0.4 2,324,397 + -0.0 2,324,397 + +1.2 2,324,397 + -0.0 2,324,397 + -1.3 2,324,397 + -0.6 2,324,397 + +0.9 2,324,397 + +1.6 2,324,397 + +0.6 2,324,397 + -0.2 2,324,398 + -0.0 2,324,398 - +0.4 2,324,398 - -1.0 2,324,398 - -0.9 2,324,398 - +0.7 2,324,398 - +0.1 2,324,398 - -0.6 2,324,398 - -1.0 2,324,412 + +0.8 2,324,413 - +0.6 2,325,087 - +0.8 2,325,127 + -1.1 2,325,128 - -0.1 2,325,170 + -0.1 2,325,170 + -0.1 2,325,170 + +0.1 2,325,170 + -0.9 2,325,170 + +0.7 2,325,170 + +0.9 2,325,170 + +0.1 2,325,170 + -0.6 2,325,170 + -0.6 2,325,171 - -0.2 2,325,171 - +0.0 2,325,171 - +0.1 2,325,171 - -0.5 2,325,171 - +0.1 2,325,171 - +0.4 2,325,171 - +0.2 2,325,171 - +0.4 2,325,171 - -0.2 2,325,171 - -0.7 2,325,171 - +0.4 2,325,171 - -0.6 2,325,175 + -0.3 2,325,175 + +0.1 2,325,175 + +1.6 2,325,175 + +0.2 2,325,175 + +1.3 2,325,175 + -0.4 2,325,175 + +1.3 2,325,175 + -0.1 2,325,175 + -0.0 2,325,175 + -0.2 2,325,175 + +0.5 2,325,175 + -0.6 2,325,175 + +0.1 2,325,175 + -0.3 2,325,175 + +1.0 2,325,175 + +0.3 2,325,175 + +0.8 2,325,175 + +0.4 2,325,175 + -0.1 2,325,175 + +0.1 2,325,175 + -0.0 2,325,175 + +0.1 2,325,175 + +1.0 2,325,176 - -0.1 2,325,176 - +0.9 2,325,176 - +0.4 2,325,176 - +0.9 2,325,176 - -0.1 2,325,176 - +0.7 2,325,176 - -0.2 2,325,176 - -0.3 2,325,176 - +0.4 2,325,176 - -0.3 2,325,176 - -0.8 2,325,176 - -0.1 2,325,176 - -0.3 2,325,176 - -0.3 2,325,176 - +0.1 2,325,176 - +0.2 2,325,176 - -0.6 2,325,176 - +0.2 2,325,176 - -0.4 2,325,176 - -0.6 2,325,334 + Ga0059261_2222 0.24 +0.0 2,325,334 + Ga0059261_2222 0.24 -0.2 2,325,334 + Ga0059261_2222 0.24 +1.2 2,325,334 + Ga0059261_2222 0.24 +1.1 2,325,334 + Ga0059261_2222 0.24 +1.1 2,325,334 + Ga0059261_2222 0.24 +1.0 2,325,334 + Ga0059261_2222 0.24 -0.0 2,325,335 - Ga0059261_2222 0.24 -0.0 2,325,335 - Ga0059261_2222 0.24 +0.5 2,325,335 - Ga0059261_2222 0.24 +0.8 2,325,335 - Ga0059261_2222 0.24 +0.2 2,325,559 + Ga0059261_2222 0.73 +0.3 2,325,559 + Ga0059261_2222 0.73 +0.0 2,325,559 + Ga0059261_2222 0.73 +0.7 2,325,559 + -0.6 2,325,559 + Ga0059261_2222 0.73 +0.2 2,325,559 + Ga0059261_2222 0.73 +0.9 2,325,560 - Ga0059261_2222 0.73 +0.3 2,325,560 - Ga0059261_2222 0.73 -0.0 2,325,560 - Ga0059261_2222 0.73 +1.6 2,325,560 - Ga0059261_2222 0.73 -0.0 2,325,560 - Ga0059261_2222 0.73 -0.2 2,325,560 - Ga0059261_2222 0.73 +0.3 2,325,560 - Ga0059261_2222 0.73 +0.3 2,325,560 - Ga0059261_2222 0.73 -0.8 2,325,704 + -0.8 2,325,724 + +0.5 2,325,724 + -1.0 2,325,724 + -0.1 2,325,724 + +0.4 2,325,724 + -0.2 2,325,724 + +0.4 2,325,724 + +0.6 2,325,724 + +0.9 2,325,725 - +0.6 2,325,725 - -0.1 2,325,725 - +1.1 2,325,725 - +0.8 2,325,725 - +1.0 2,325,725 - -0.2 2,325,725 - -0.3 2,325,725 - -0.8 2,325,725 - +0.5
Or see this region's nucleotide sequence