Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1241

Experiment: sodium fluoride 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium fluoride 10 mM
1,301,927	+		Ga0059261_1239	0.52	-0.1
1,301,927	+		Ga0059261_1239	0.52	+0.2
1,301,927	+		Ga0059261_1239	0.52	+0.7
1,301,928	-		Ga0059261_1239	0.52	-0.4
1,301,928	-		Ga0059261_1239	0.52	+0.5
1,301,928	-		Ga0059261_1239	0.52	-0.3
1,301,928	-		Ga0059261_1239	0.52	-0.2
1,301,928	-		Ga0059261_1239	0.52	+0.5
1,301,928	-		Ga0059261_1239	0.52	-2.2
1,302,044	+		Ga0059261_1239	0.60	+0.4
1,302,044	+		Ga0059261_1239	0.60	-0.4
1,302,044	+		Ga0059261_1239	0.60	+0.9
1,302,044	+		Ga0059261_1239	0.60	-1.3
1,302,044	+		Ga0059261_1239	0.60	+0.3
1,302,045	-				+0.8
1,302,045	-		Ga0059261_1239	0.60	+0.1
1,302,099	+		Ga0059261_1239	0.64	-0.5
1,302,159	+		Ga0059261_1239	0.68	-0.6
1,302,160	-		Ga0059261_1239	0.68	+0.3
1,302,160	-		Ga0059261_1239	0.68	+0.5
1,302,220	-		Ga0059261_1239	0.72	+0.4
1,302,248	+		Ga0059261_1239	0.74	-0.1
1,302,249	-		Ga0059261_1239	0.74	-0.3
1,302,258	+		Ga0059261_1239	0.75	-0.2
1,302,259	-		Ga0059261_1239	0.75	-0.1
1,302,259	-		Ga0059261_1239	0.75	-0.5
1,302,259	-		Ga0059261_1239	0.75	-0.1
1,302,259	-		Ga0059261_1239	0.75	-0.2
1,302,263	+		Ga0059261_1239	0.75	-0.2
1,302,263	+		Ga0059261_1239	0.75	-1.1
1,302,263	+		Ga0059261_1239	0.75	+0.1
1,302,263	+		Ga0059261_1239	0.75	-0.7
1,302,263	+		Ga0059261_1239	0.75	-0.9
1,302,264	-		Ga0059261_1239	0.75	+0.2
1,302,264	-		Ga0059261_1239	0.75	+0.5
1,302,264	-		Ga0059261_1239	0.75	+0.3
1,302,264	-		Ga0059261_1239	0.75	-0.2
1,302,264	-		Ga0059261_1239	0.75	-1.1
1,302,264	-		Ga0059261_1239	0.75	-0.7
1,302,264	-		Ga0059261_1239	0.75	-1.7
1,302,264	-		Ga0059261_1239	0.75	+0.4
1,302,564	+				-0.3
1,302,564	+				-0.4
1,302,564	+				-0.8
1,302,564	+				-0.2
1,302,565	-				-0.3
1,302,565	-				-0.0
1,302,572	+				+0.6
1,302,572	+				+0.8
1,302,572	+				-0.1
1,302,573	-				-0.3
1,302,651	+				-0.0
1,302,651	+				-1.0
1,302,652	-				-0.1
1,302,652	-				+0.9
1,302,652	-				-0.3
1,302,708	+		Ga0059261_1240	0.28	-0.9
1,302,708	+		Ga0059261_1240	0.28	-0.9
1,302,708	+		Ga0059261_1240	0.28	-0.1
1,302,708	+		Ga0059261_1240	0.28	+0.5
1,302,709	-		Ga0059261_1240	0.28	-1.8
1,302,709	-		Ga0059261_1240	0.28	+1.5
1,302,709	-		Ga0059261_1240	0.28	-0.4
1,302,724	+		Ga0059261_1240	0.34	+0.0
1,302,724	+		Ga0059261_1240	0.34	-1.2
1,302,724	+		Ga0059261_1240	0.34	+1.0
1,302,724	+		Ga0059261_1240	0.34	-1.2
1,302,724	+		Ga0059261_1240	0.34	-0.1
1,302,724	+		Ga0059261_1240	0.34	-0.9
1,302,725	-		Ga0059261_1240	0.34	+0.3
1,302,725	-		Ga0059261_1240	0.34	-0.1
1,302,881	+		Ga0059261_1240	0.89	+2.0
1,302,940	+				+0.2
1,302,940	+				-0.5
1,302,940	+				+0.0
1,302,940	+				+0.2
1,302,941	-				-0.2
1,302,941	-				-0.5
1,302,941	-				-0.2
1,302,953	+				-0.3
1,302,953	+				-0.6
1,302,953	+				-0.2
1,303,073	+		Ga0059261_1241	0.40	+0.3
1,303,073	+		Ga0059261_1241	0.40	-0.4
1,303,073	+		Ga0059261_1241	0.40	-0.1
1,303,073	+		Ga0059261_1241	0.40	+0.5
1,303,073	+		Ga0059261_1241	0.40	-0.2
1,303,073	+		Ga0059261_1241	0.40	+0.5
1,303,073	+		Ga0059261_1241	0.40	+0.4
1,303,073	+		Ga0059261_1241	0.40	-0.5
1,303,073	+		Ga0059261_1241	0.40	+0.5
1,303,073	+		Ga0059261_1241	0.40	+0.7
1,303,074	-		Ga0059261_1241	0.40	-0.1
1,303,074	-		Ga0059261_1241	0.40	-1.1
1,303,074	-		Ga0059261_1241	0.40	+0.7
1,303,074	-		Ga0059261_1241	0.40	+0.3
1,303,074	-		Ga0059261_1241	0.40	+0.2
1,303,074	-		Ga0059261_1241	0.40	-0.7
1,303,074	-		Ga0059261_1241	0.40	+0.5
1,303,074	-		Ga0059261_1241	0.40	-0.1
1,303,133	+		Ga0059261_1241	0.56	+0.3
1,303,134	-		Ga0059261_1241	0.56	+0.5
1,303,263	+				-1.0
1,303,263	+				-0.1
1,303,263	+				+0.6
1,303,263	+				-1.2
1,303,263	+				+0.6
1,303,264	-				-0.6
1,303,327	+				+0.3
1,303,327	+				-0.2
1,303,328	-				+2.2
1,303,328	-				+1.0
1,303,328	-				-0.5
1,303,328	-				-1.2
1,303,328	-				-0.5
1,303,328	-				-0.5
1,303,328	-				+0.1
1,303,362	+				-0.0
1,303,362	+				+0.8
1,303,362	+				-0.3
1,303,362	+				+0.1
1,303,362	+				+0.5
1,303,362	+				+1.5
1,303,363	-				+0.5
1,303,363	-				+0.4
1,303,363	-				-0.5
1,303,363	-				+0.8
1,303,461	+		Ga0059261_1242	0.20	-0.3
1,303,462	-		Ga0059261_1242	0.20	-0.3
1,303,462	-		Ga0059261_1242	0.20	+0.5
1,303,464	+		Ga0059261_1242	0.21	+0.1
1,303,464	+				+1.0
1,303,464	+		Ga0059261_1242	0.21	-0.5
1,303,464	+		Ga0059261_1242	0.21	-0.2
1,303,465	-		Ga0059261_1242	0.21	+0.3
1,303,465	-		Ga0059261_1242	0.21	+0.3
1,303,465	-		Ga0059261_1242	0.21	-1.4
1,303,465	-		Ga0059261_1242	0.21	+0.3
1,303,465	-		Ga0059261_1242	0.21	-0.4
1,303,483	+		Ga0059261_1242	0.25	-1.1
1,303,521	+		Ga0059261_1242	0.34	+0.4
1,303,522	-		Ga0059261_1242	0.34	-0.7
1,303,522	-				-0.2
1,303,682	+		Ga0059261_1242	0.70	-1.1
1,303,682	+		Ga0059261_1242	0.70	+0.0
1,303,683	-		Ga0059261_1242	0.70	-1.2
1,303,683	-		Ga0059261_1242	0.70	+0.8
1,303,783	+				+1.0
1,303,783	+				-0.5
1,303,783	+				-0.2
1,303,784	-				+1.8
1,303,784	-				+0.2
1,303,824	+				-0.0
1,303,824	+				+0.3
1,303,824	+				+0.3
1,303,824	+				-0.0
1,303,824	+				-0.4
1,303,824	+				-0.5
1,303,824	+				-0.2
1,303,824	+				-0.0
1,303,825	-				-0.1
1,303,825	-				-0.5
1,303,825	-				+0.1
1,303,825	-				+0.6
1,303,825	-				-0.7
1,303,830	+				-0.2
1,303,830	+				-0.2
1,303,830	+				+0.7
1,303,830	+				-1.3
1,303,830	+				-0.3
1,303,830	+				-0.3
1,303,830	+				+0.6
1,303,830	+				+0.0
1,303,830	+				-0.8
1,303,830	+				+0.8
1,303,830	+				-0.8
1,303,830	+				+1.3
1,303,830	+				+0.2
1,303,830	+				+0.1
1,303,830	+				+0.2
1,303,830	+				-0.5
1,303,830	+				-0.8
1,303,830	+				-0.0
1,303,830	+				-0.0
1,303,830	+				+0.2
1,303,830	+				+0.1
1,303,830	+				+0.2
1,303,830	+				+0.8
1,303,830	+				+0.3
1,303,830	+				-0.3
1,303,830	+				+0.9
1,303,830	+				-0.6
1,303,830	+				+0.2
1,303,830	+				+0.8
1,303,830	+				-0.7
1,303,830	+				-0.4
1,303,830	+				-0.8
1,303,830	+				-0.5
1,303,830	+				-0.9
1,303,830	+				+0.4
1,303,830	+				-1.2
1,303,830	+				-1.8
1,303,830	+				-0.1
1,303,830	+				+1.0
1,303,830	+				+0.0
1,303,830	+				+1.1
1,303,830	+				+0.5
1,303,831	-				-0.5
1,303,831	-				+0.1
1,303,831	-				-0.1
1,303,831	-				-1.0
1,303,831	-				+0.6
1,303,831	-				+0.1
1,303,831	-				-0.4
1,303,831	-				+1.0
1,303,831	-				-0.1
1,303,831	-				-1.2
1,303,831	-				+1.2
1,303,831	-				+0.7
1,303,831	-				-0.1
1,303,831	-				+0.3
1,303,831	-				-0.5
1,303,831	-				+0.2
1,303,831	-				-0.4
1,303,831	-				+0.0
1,303,831	-				-0.2
1,303,831	-				-0.2
1,303,831	-				+0.1
1,303,831	-				-0.2
1,303,831	-				-0.4
1,303,831	-				+0.0
1,303,831	-				+0.3
1,303,831	-				+1.2
1,303,831	-				+0.1
1,303,831	-				+0.1
1,303,831	-				-1.5
1,303,831	-				+1.2
1,303,831	-				-0.2
1,303,831	-				+0.5
1,303,831	-				+0.5
1,303,831	-				+0.2
1,303,831	-				-0.2
1,303,831	-				+0.6
1,303,831	-				+0.8
1,303,971	-				-0.1