Experiment: sodium fluoride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0917 and Ga0059261_0918 are separated by 22 nucleotides Ga0059261_0918 and Ga0059261_0919 overlap by 4 nucleotides Ga0059261_0919 and Ga0059261_0920 overlap by 1 nucleotides Ga0059261_0920 and Ga0059261_0921 are separated by 106 nucleotides Ga0059261_0921 and Ga0059261_0922 are separated by 62 nucleotides
Ga0059261_0917: Ga0059261_0917 - Predicted P-loop-containing kinase, at 950,871 to 951,791
_0917
Ga0059261_0918: Ga0059261_0918 - Phosphotransferase system, mannose/fructose-specific component IIA, at 951,814 to 952,221
_0918
Ga0059261_0919: Ga0059261_0919 - Phosphotransferase System HPr (HPr) Family, at 952,218 to 952,490
_0919
Ga0059261_0920: Ga0059261_0920 - rRNA methylases, at 952,490 to 953,293
_0920
Ga0059261_0921: Ga0059261_0921 - hypothetical protein, at 953,400 to 953,627
_0921
Ga0059261_0922: Ga0059261_0922 - cysteinyl-tRNA synthetase (EC 6.1.1.16), at 953,690 to 955,120
_0922
Position (kb) 952
953
954 Strain fitness (log2 ratio) -2
-1
0
1
2 at 951.528 kb on + strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.549 kb on + strand, within Ga0059261_0917 at 951.549 kb on + strand, within Ga0059261_0917 at 951.550 kb on - strand, within Ga0059261_0917 at 951.624 kb on + strand, within Ga0059261_0917 at 951.624 kb on + strand, within Ga0059261_0917 at 951.624 kb on + strand, within Ga0059261_0917 at 951.625 kb on - strand, within Ga0059261_0917 at 951.629 kb on + strand, within Ga0059261_0917 at 951.629 kb on + strand, within Ga0059261_0917 at 951.629 kb on + strand, within Ga0059261_0917 at 951.629 kb on + strand, within Ga0059261_0917 at 951.629 kb on + strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.766 kb on + strand at 951.766 kb on + strand at 951.766 kb on + strand at 951.828 kb on - strand at 951.907 kb on - strand, within Ga0059261_0918 at 951.907 kb on - strand, within Ga0059261_0918 at 951.907 kb on - strand, within Ga0059261_0918 at 951.933 kb on + strand, within Ga0059261_0918 at 951.934 kb on - strand, within Ga0059261_0918 at 951.934 kb on - strand, within Ga0059261_0918 at 952.177 kb on + strand, within Ga0059261_0918 at 952.177 kb on + strand, within Ga0059261_0918 at 952.177 kb on + strand, within Ga0059261_0918 at 952.177 kb on + strand, within Ga0059261_0918 at 952.177 kb on + strand, within Ga0059261_0918 at 952.177 kb on + strand at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.637 kb on + strand, within Ga0059261_0920 at 952.637 kb on + strand, within Ga0059261_0920 at 952.638 kb on - strand, within Ga0059261_0920 at 952.638 kb on - strand, within Ga0059261_0920 at 952.638 kb on - strand, within Ga0059261_0920 at 952.638 kb on - strand, within Ga0059261_0920 at 952.791 kb on - strand, within Ga0059261_0920 at 952.897 kb on + strand, within Ga0059261_0920 at 953.168 kb on + strand, within Ga0059261_0920 at 953.168 kb on + strand, within Ga0059261_0920 at 953.200 kb on - strand, within Ga0059261_0920 at 953.221 kb on + strand at 953.222 kb on - strand at 953.222 kb on - strand at 953.222 kb on - strand at 953.222 kb on - strand at 953.258 kb on + strand at 953.258 kb on + strand at 953.258 kb on + strand at 953.259 kb on - strand at 953.259 kb on - strand at 953.259 kb on - strand at 953.259 kb on - strand at 953.259 kb on - strand at 953.260 kb on + strand at 953.260 kb on + strand at 953.260 kb on + strand at 953.261 kb on - strand at 953.261 kb on - strand at 953.268 kb on + strand at 953.268 kb on + strand at 953.269 kb on - strand at 953.403 kb on + strand at 953.403 kb on + strand at 953.403 kb on + strand at 953.403 kb on + strand at 953.404 kb on - strand at 953.404 kb on - strand at 953.406 kb on + strand at 953.406 kb on + strand at 953.407 kb on - strand at 953.407 kb on - strand at 953.407 kb on - strand at 953.407 kb on - strand at 953.407 kb on - strand at 953.407 kb on - strand at 953.475 kb on + strand, within Ga0059261_0921 at 953.475 kb on + strand, within Ga0059261_0921 at 953.476 kb on - strand, within Ga0059261_0921 at 953.561 kb on + strand, within Ga0059261_0921 at 953.562 kb on - strand, within Ga0059261_0921
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 10 mM remove 951,528 + Ga0059261_0917 0.71 +1.0 951,529 - Ga0059261_0917 0.71 -0.9 951,529 - Ga0059261_0917 0.71 +1.6 951,529 - Ga0059261_0917 0.71 -0.5 951,529 - Ga0059261_0917 0.71 -1.2 951,529 - Ga0059261_0917 0.71 -1.7 951,529 - Ga0059261_0917 0.71 +0.6 951,549 + Ga0059261_0917 0.74 -2.2 951,549 + Ga0059261_0917 0.74 -0.4 951,550 - Ga0059261_0917 0.74 +0.1 951,624 + Ga0059261_0917 0.82 -1.0 951,624 + Ga0059261_0917 0.82 -0.2 951,624 + Ga0059261_0917 0.82 +0.0 951,625 - Ga0059261_0917 0.82 -0.5 951,629 + Ga0059261_0917 0.82 -0.5 951,629 + Ga0059261_0917 0.82 +0.1 951,629 + Ga0059261_0917 0.82 +0.7 951,629 + Ga0059261_0917 0.82 -1.5 951,629 + Ga0059261_0917 0.82 +0.2 951,630 - Ga0059261_0917 0.82 -0.8 951,630 - Ga0059261_0917 0.82 -0.4 951,630 - Ga0059261_0917 0.82 -0.8 951,630 - Ga0059261_0917 0.82 -0.1 951,630 - Ga0059261_0917 0.82 -0.3 951,630 - Ga0059261_0917 0.82 -0.3 951,766 + +0.2 951,766 + -0.3 951,766 + -0.3 951,828 - +0.7 951,907 - Ga0059261_0918 0.23 -0.5 951,907 - Ga0059261_0918 0.23 +0.1 951,907 - Ga0059261_0918 0.23 +1.1 951,933 + Ga0059261_0918 0.29 +0.4 951,934 - Ga0059261_0918 0.29 +1.8 951,934 - Ga0059261_0918 0.29 +0.5 952,177 + Ga0059261_0918 0.89 +0.2 952,177 + Ga0059261_0918 0.89 -0.3 952,177 + Ga0059261_0918 0.89 +0.4 952,177 + Ga0059261_0918 0.89 -0.1 952,177 + Ga0059261_0918 0.89 +0.9 952,177 + -0.2 952,178 - Ga0059261_0918 0.89 +1.4 952,178 - Ga0059261_0918 0.89 -0.9 952,178 - Ga0059261_0918 0.89 +0.0 952,178 - Ga0059261_0918 0.89 +0.1 952,178 - Ga0059261_0918 0.89 +0.6 952,178 - Ga0059261_0918 0.89 +0.6 952,178 - Ga0059261_0918 0.89 +0.2 952,637 + Ga0059261_0920 0.18 +0.1 952,637 + Ga0059261_0920 0.18 +0.5 952,638 - Ga0059261_0920 0.18 +0.2 952,638 - Ga0059261_0920 0.18 -1.2 952,638 - Ga0059261_0920 0.18 +0.4 952,638 - Ga0059261_0920 0.18 -0.0 952,791 - Ga0059261_0920 0.37 +1.2 952,897 + Ga0059261_0920 0.51 -0.2 953,168 + Ga0059261_0920 0.84 -0.5 953,168 + Ga0059261_0920 0.84 +0.5 953,200 - Ga0059261_0920 0.88 +0.8 953,221 + +0.6 953,222 - +0.0 953,222 - -0.2 953,222 - +0.1 953,222 - -0.9 953,258 + -0.5 953,258 + -0.5 953,258 + -0.5 953,259 - +0.6 953,259 - +0.7 953,259 - +0.8 953,259 - -0.1 953,259 - -1.0 953,260 + +0.1 953,260 + -0.1 953,260 + +0.9 953,261 - -0.3 953,261 - +0.2 953,268 + -0.8 953,268 + -0.2 953,269 - +0.5 953,403 + +0.2 953,403 + +1.3 953,403 + +0.3 953,403 + -0.0 953,404 - -0.6 953,404 - +0.9 953,406 + +0.3 953,406 + +0.3 953,407 - +0.1 953,407 - +0.5 953,407 - +0.8 953,407 - -0.8 953,407 - -0.2 953,407 - +0.8 953,475 + Ga0059261_0921 0.33 -2.1 953,475 + Ga0059261_0921 0.33 +0.1 953,476 - Ga0059261_0921 0.33 -0.5 953,561 + Ga0059261_0921 0.71 +0.9 953,562 - Ga0059261_0921 0.71 +0.4
Or see this region's nucleotide sequence