Experiment: sodium fluoride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0595 and Ga0059261_0596 are separated by 62 nucleotides Ga0059261_0596 and Ga0059261_0597 overlap by 4 nucleotides Ga0059261_0597 and Ga0059261_0598 are separated by 21 nucleotides
Ga0059261_0595: Ga0059261_0595 - heavy metal efflux pump, CzcA family, at 627,286 to 630,516
_0595
Ga0059261_0596: Ga0059261_0596 - Cation efflux family, at 630,579 to 631,184
_0596
Ga0059261_0597: Ga0059261_0597 - hypothetical protein, at 631,181 to 631,396
_0597
Ga0059261_0598: Ga0059261_0598 - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family, at 631,418 to 633,082
_0598
Position (kb) 630
631
632 Strain fitness (log2 ratio) -2
-1
0
1
2 at 629.923 kb on + strand, within Ga0059261_0595 at 629.924 kb on - strand, within Ga0059261_0595 at 630.022 kb on + strand, within Ga0059261_0595 at 630.022 kb on + strand, within Ga0059261_0595 at 630.023 kb on - strand, within Ga0059261_0595 at 630.430 kb on + strand at 630.430 kb on + strand at 630.430 kb on + strand at 630.431 kb on - strand at 630.431 kb on - strand at 630.514 kb on + strand at 630.515 kb on - strand at 630.515 kb on - strand at 630.744 kb on + strand, within Ga0059261_0596 at 630.744 kb on + strand, within Ga0059261_0596 at 630.744 kb on + strand, within Ga0059261_0596 at 630.745 kb on - strand at 630.928 kb on + strand, within Ga0059261_0596 at 630.928 kb on + strand, within Ga0059261_0596 at 630.928 kb on + strand, within Ga0059261_0596 at 630.928 kb on + strand, within Ga0059261_0596 at 630.976 kb on + strand, within Ga0059261_0596 at 630.976 kb on + strand, within Ga0059261_0596 at 630.976 kb on + strand, within Ga0059261_0596 at 630.977 kb on - strand, within Ga0059261_0596 at 630.977 kb on - strand, within Ga0059261_0596 at 631.105 kb on + strand, within Ga0059261_0596 at 631.188 kb on + strand at 631.188 kb on + strand at 631.188 kb on + strand at 631.189 kb on - strand at 631.360 kb on + strand, within Ga0059261_0597 at 631.360 kb on + strand, within Ga0059261_0597 at 631.360 kb on + strand, within Ga0059261_0597 at 631.360 kb on + strand at 631.360 kb on + strand, within Ga0059261_0597 at 631.360 kb on + strand, within Ga0059261_0597 at 631.361 kb on - strand, within Ga0059261_0597 at 631.361 kb on - strand, within Ga0059261_0597 at 631.361 kb on - strand, within Ga0059261_0597 at 631.530 kb on + strand at 631.530 kb on + strand at 631.530 kb on + strand at 631.530 kb on + strand at 631.530 kb on + strand at 631.530 kb on + strand at 631.572 kb on + strand at 631.572 kb on + strand at 631.572 kb on + strand at 631.572 kb on + strand at 631.572 kb on + strand at 631.573 kb on - strand at 631.573 kb on - strand at 631.573 kb on - strand at 631.573 kb on - strand at 631.573 kb on - strand at 631.581 kb on + strand at 631.581 kb on + strand at 631.582 kb on - strand at 631.689 kb on + strand, within Ga0059261_0598 at 631.689 kb on + strand, within Ga0059261_0598 at 631.689 kb on + strand, within Ga0059261_0598 at 631.689 kb on + strand, within Ga0059261_0598 at 631.690 kb on - strand, within Ga0059261_0598 at 631.690 kb on - strand, within Ga0059261_0598 at 631.690 kb on - strand, within Ga0059261_0598 at 631.690 kb on - strand, within Ga0059261_0598 at 631.705 kb on + strand, within Ga0059261_0598 at 631.706 kb on - strand, within Ga0059261_0598 at 631.706 kb on - strand, within Ga0059261_0598 at 631.706 kb on - strand, within Ga0059261_0598 at 631.706 kb on - strand, within Ga0059261_0598 at 631.823 kb on - strand, within Ga0059261_0598 at 632.052 kb on - strand, within Ga0059261_0598
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 10 mM remove 629,923 + Ga0059261_0595 0.82 -0.2 629,924 - Ga0059261_0595 0.82 +0.8 630,022 + Ga0059261_0595 0.85 -0.0 630,022 + Ga0059261_0595 0.85 -0.1 630,023 - Ga0059261_0595 0.85 -0.3 630,430 + +0.0 630,430 + -2.5 630,430 + +0.1 630,431 - +1.8 630,431 - -0.4 630,514 + -0.4 630,515 - +1.4 630,515 - +0.7 630,744 + Ga0059261_0596 0.27 +1.5 630,744 + Ga0059261_0596 0.27 +1.3 630,744 + Ga0059261_0596 0.27 -0.2 630,745 - +1.5 630,928 + Ga0059261_0596 0.58 +0.1 630,928 + Ga0059261_0596 0.58 +0.7 630,928 + Ga0059261_0596 0.58 +0.2 630,928 + Ga0059261_0596 0.58 -0.4 630,976 + Ga0059261_0596 0.66 +0.0 630,976 + Ga0059261_0596 0.66 -0.3 630,976 + Ga0059261_0596 0.66 +0.0 630,977 - Ga0059261_0596 0.66 -0.1 630,977 - Ga0059261_0596 0.66 +0.9 631,105 + Ga0059261_0596 0.87 +0.6 631,188 + -0.7 631,188 + +0.1 631,188 + +0.3 631,189 - +1.8 631,360 + Ga0059261_0597 0.83 -0.4 631,360 + Ga0059261_0597 0.83 +0.5 631,360 + Ga0059261_0597 0.83 -0.0 631,360 + -0.2 631,360 + Ga0059261_0597 0.83 +0.2 631,360 + Ga0059261_0597 0.83 +1.2 631,361 - Ga0059261_0597 0.83 -0.7 631,361 - Ga0059261_0597 0.83 -0.2 631,361 - Ga0059261_0597 0.83 +0.4 631,530 + -0.1 631,530 + -1.9 631,530 + -0.4 631,530 + -0.6 631,530 + -0.1 631,530 + +0.3 631,572 + +0.2 631,572 + +0.2 631,572 + +0.0 631,572 + -0.5 631,572 + -0.2 631,573 - +0.2 631,573 - -0.5 631,573 - -0.3 631,573 - -0.5 631,573 - -1.4 631,581 + +0.1 631,581 + -0.3 631,582 - -0.5 631,689 + Ga0059261_0598 0.16 +1.0 631,689 + Ga0059261_0598 0.16 -0.3 631,689 + Ga0059261_0598 0.16 -0.5 631,689 + Ga0059261_0598 0.16 -1.2 631,690 - Ga0059261_0598 0.16 -0.5 631,690 - Ga0059261_0598 0.16 +0.0 631,690 - Ga0059261_0598 0.16 -0.5 631,690 - Ga0059261_0598 0.16 +0.2 631,705 + Ga0059261_0598 0.17 -0.4 631,706 - Ga0059261_0598 0.17 -0.1 631,706 - Ga0059261_0598 0.17 -1.0 631,706 - Ga0059261_0598 0.17 +0.1 631,706 - Ga0059261_0598 0.17 -0.0 631,823 - Ga0059261_0598 0.24 -0.4 632,052 - Ga0059261_0598 0.38 -0.3
Or see this region's nucleotide sequence