Experiment: sodium fluoride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0082 and Ga0059261_0083 are separated by 372 nucleotides Ga0059261_0083 and Ga0059261_0084 are separated by 19 nucleotides Ga0059261_0084 and Ga0059261_0085 are separated by 104 nucleotides
Ga0059261_0082: Ga0059261_0082 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC 6.3.5.-), at 74,627 to 76,111
_0082
Ga0059261_0083: Ga0059261_0083 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC 6.3.5.-), at 76,484 to 77,944
_0083
Ga0059261_0084: Ga0059261_0084 - hypothetical protein, at 77,964 to 78,458
_0084
Ga0059261_0085: Ga0059261_0085 - hypothetical protein, at 78,563 to 79,408
_0085
Position (kb) 76
77
78 Strain fitness (log2 ratio) -2
-1
0
1 at 76.109 kb on + strand at 76.109 kb on + strand at 76.109 kb on + strand at 76.142 kb on + strand at 76.142 kb on + strand at 76.142 kb on + strand at 76.180 kb on + strand at 76.180 kb on + strand at 76.258 kb on + strand at 76.447 kb on + strand at 76.447 kb on + strand at 77.307 kb on - strand, within Ga0059261_0083 at 77.972 kb on + strand at 77.972 kb on + strand at 77.972 kb on + strand at 77.972 kb on + strand at 77.972 kb on + strand at 77.972 kb on + strand at 77.973 kb on - strand at 77.973 kb on - strand at 77.973 kb on - strand at 77.973 kb on - strand at 77.973 kb on - strand at 78.064 kb on - strand, within Ga0059261_0084 at 78.120 kb on + strand, within Ga0059261_0084 at 78.120 kb on + strand, within Ga0059261_0084 at 78.121 kb on - strand, within Ga0059261_0084 at 78.456 kb on + strand at 78.456 kb on + strand at 78.474 kb on + strand at 78.474 kb on + strand at 78.475 kb on - strand at 78.475 kb on - strand at 78.475 kb on - strand at 78.481 kb on + strand at 78.482 kb on - strand at 78.482 kb on - strand at 78.482 kb on - strand at 78.494 kb on + strand at 78.518 kb on + strand at 78.518 kb on + strand at 78.518 kb on + strand at 78.585 kb on + strand at 78.585 kb on + strand at 78.585 kb on + strand at 78.585 kb on + strand at 78.606 kb on + strand at 78.606 kb on + strand at 78.607 kb on - strand at 78.634 kb on + strand at 78.634 kb on + strand at 78.634 kb on + strand at 78.634 kb on + strand at 78.635 kb on - strand at 78.635 kb on - strand at 78.635 kb on - strand at 78.638 kb on + strand at 78.638 kb on + strand at 78.638 kb on + strand at 78.638 kb on + strand at 78.638 kb on + strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.683 kb on + strand, within Ga0059261_0085 at 78.684 kb on - strand, within Ga0059261_0085 at 78.684 kb on - strand, within Ga0059261_0085 at 78.684 kb on - strand, within Ga0059261_0085 at 78.706 kb on + strand, within Ga0059261_0085 at 78.790 kb on + strand, within Ga0059261_0085 at 78.839 kb on - strand, within Ga0059261_0085 at 78.839 kb on - strand, within Ga0059261_0085
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 10 mM remove 76,109 + +0.2 76,109 + -0.2 76,109 + +0.5 76,142 + +0.5 76,142 + -0.6 76,142 + -0.4 76,180 + +0.6 76,180 + +0.3 76,258 + -0.9 76,447 + -0.5 76,447 + -0.6 77,307 - Ga0059261_0083 0.56 +0.3 77,972 + +0.4 77,972 + -0.1 77,972 + -0.1 77,972 + +0.7 77,972 + -0.5 77,972 + +1.0 77,973 - -0.3 77,973 - +0.4 77,973 - +0.1 77,973 - -1.4 77,973 - +0.3 78,064 - Ga0059261_0084 0.20 -1.1 78,120 + Ga0059261_0084 0.32 +0.5 78,120 + Ga0059261_0084 0.32 -0.4 78,121 - Ga0059261_0084 0.32 -0.5 78,456 + +0.1 78,456 + +0.4 78,474 + -0.1 78,474 + -0.4 78,475 - +0.2 78,475 - +0.2 78,475 - +0.6 78,481 + +0.3 78,482 - -0.1 78,482 - +0.5 78,482 - +0.6 78,494 + +0.4 78,518 + -0.3 78,518 + -0.5 78,518 + -1.3 78,585 + +0.0 78,585 + -0.5 78,585 + +0.5 78,585 + -0.1 78,606 + +0.5 78,606 + -0.2 78,607 - +0.5 78,634 + +0.3 78,634 + -0.3 78,634 + -2.3 78,634 + +0.1 78,635 - +0.6 78,635 - +0.2 78,635 - +0.8 78,638 + -0.1 78,638 + +1.0 78,638 + +0.5 78,638 + +0.2 78,638 + -1.5 78,639 - +0.6 78,639 - +0.9 78,639 - +0.2 78,639 - -0.4 78,639 - +0.1 78,639 - +0.4 78,639 - +0.1 78,639 - -0.4 78,639 - +0.7 78,639 - +0.4 78,683 + Ga0059261_0085 0.14 -0.1 78,684 - Ga0059261_0085 0.14 -0.5 78,684 - Ga0059261_0085 0.14 +0.4 78,684 - Ga0059261_0085 0.14 -0.4 78,706 + Ga0059261_0085 0.17 +0.4 78,790 + Ga0059261_0085 0.27 +0.7 78,839 - Ga0059261_0085 0.33 -0.1 78,839 - Ga0059261_0085 0.33 +0.3
Or see this region's nucleotide sequence