Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03598

Experiment: PYE with Thallium(I) acetate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Thallium(I) acetate 0.004 mg/ml
3,749,303	-				+0.1
3,749,309	-				+0.2
3,749,319	+				+0.2
3,749,326	-				-1.3
3,749,350	-				+1.8
3,749,403	-		CCNA_03596	0.20	+0.1
3,749,411	+		CCNA_03596	0.22	-0.7
3,749,419	-		CCNA_03596	0.24	+0.9
3,749,440	-		CCNA_03596	0.29	-0.2
3,749,441	+		CCNA_03596	0.29	+0.3
3,749,475	+		CCNA_03596	0.38	+0.5
3,749,485	-		CCNA_03596	0.40	+0.5
3,749,530	-		CCNA_03596	0.51	-1.0
3,749,530	-		CCNA_03596	0.51	-0.4
3,749,531	+		CCNA_03596	0.51	-1.1
3,749,532	+		CCNA_03596	0.52	+0.8
3,749,540	-		CCNA_03596	0.54	-0.7
3,749,564	-		CCNA_03596	0.60	+0.6
3,749,566	+		CCNA_03596	0.60	+1.8
3,749,571	+		CCNA_03596	0.61	-2.5
3,749,571	+		CCNA_03596	0.61	-0.6
3,749,571	+		CCNA_03596	0.61	-0.1
3,749,571	+		CCNA_03596	0.61	+1.6
3,749,571	+		CCNA_03596	0.61	+0.0
3,749,571	+		CCNA_03596	0.61	-0.8
3,749,571	+		CCNA_03596	0.61	+0.2
3,749,571	+		CCNA_03596	0.61	-2.5
3,749,571	+		CCNA_03596	0.61	-1.8
3,749,571	+		CCNA_03596	0.61	-2.1
3,749,571	+		CCNA_03596	0.61	-0.0
3,749,571	+		CCNA_03596	0.61	+0.2
3,749,571	+		CCNA_03596	0.61	-0.3
3,749,571	+		CCNA_03596	0.61	-0.6
3,749,571	+		CCNA_03596	0.61	-0.5
3,749,571	+		CCNA_03596	0.61	-1.3
3,749,571	+		CCNA_03596	0.61	-0.2
3,749,579	-		CCNA_03596	0.63	+0.6
3,749,579	-		CCNA_03596	0.63	+0.2
3,749,579	-		CCNA_03596	0.63	+0.4
3,749,579	-		CCNA_03596	0.63	+0.1
3,749,579	-		CCNA_03596	0.63	+0.4
3,749,579	-				+1.8
3,749,579	-		CCNA_03596	0.63	+0.2
3,749,579	-		CCNA_03596	0.63	-0.1
3,749,579	-		CCNA_03596	0.63	-0.8
3,749,579	-		CCNA_03596	0.63	+0.7
3,749,579	-		CCNA_03596	0.63	+0.3
3,749,579	-		CCNA_03596	0.63	+0.6
3,749,579	-		CCNA_03596	0.63	+2.0
3,749,579	-		CCNA_03596	0.63	+1.8
3,749,579	-		CCNA_03596	0.63	+0.0
3,749,579	-		CCNA_03596	0.63	-0.1
3,749,579	-		CCNA_03596	0.63	+1.6
3,749,603	+		CCNA_03596	0.69	-1.6
3,749,607	-		CCNA_03596	0.70	+0.5
3,749,654	+		CCNA_03596	0.82	+1.5
3,749,656	-		CCNA_03596	0.82	+0.3
3,749,670	+		CCNA_03596	0.86	-0.6
3,749,679	-		CCNA_03596	0.88	+0.6
3,749,712	+				+1.2
3,749,796	+		CCNA_03597	0.18	+0.1
3,749,840	+		CCNA_03597	0.29	+1.4
3,749,886	+		CCNA_03597	0.40	+0.6
3,749,899	+		CCNA_03597	0.43	+0.1
3,749,899	-		CCNA_03597	0.43	+1.6
3,749,907	-		CCNA_03597	0.45	-0.1
3,749,917	+		CCNA_03597	0.48	+1.2
3,749,917	+		CCNA_03597	0.48	-0.4
3,749,922	+		CCNA_03597	0.49	+0.2
3,749,925	-		CCNA_03597	0.50	+1.8
3,749,925	-		CCNA_03597	0.50	-0.6
3,749,930	+		CCNA_03597	0.51	-0.5
3,749,938	-		CCNA_03597	0.53	-1.3
3,749,942	-		CCNA_03597	0.54	-0.4
3,749,957	-		CCNA_03597	0.58	+0.7
3,749,957	-		CCNA_03597	0.58	+0.0
3,749,985	-		CCNA_03597	0.65	+0.4
3,749,985	-		CCNA_03597	0.65	+0.2
3,749,993	-		CCNA_03597	0.67	+1.3
3,750,065	-		CCNA_03597	0.85	+0.4
3,750,073	+		CCNA_03597	0.87	+0.1
3,750,086	-				+0.3
3,750,111	+				+0.8
3,750,116	+				+0.2
3,750,130	-				+0.3
3,750,137	-				-0.0
3,750,280	-				+0.1
3,750,292	+				-0.5
3,750,292	+				+0.5
3,750,300	-				-2.3
3,752,145	+		CCNA_03598	0.80	+1.2
3,752,145	+		CCNA_03598	0.80	+1.1
3,752,145	+		CCNA_03598	0.80	+0.1
3,752,187	+		CCNA_03598	0.82	-0.9
3,752,456	+				+2.0
3,752,565	-				+1.4
3,752,565	-				-1.6
3,752,572	+				+0.5
3,752,577	+				-0.1
3,752,587	+				-1.1
3,752,652	+				-0.3
3,752,660	-				+0.6
3,752,660	-				+0.1
3,752,676	+				-1.5
3,752,693	+				-0.6
3,752,701	-				-0.4
3,752,706	+				-0.5
3,752,817	+				+0.1
3,752,851	+				+0.8
3,752,851	-				+0.4
3,752,863	-				-0.5
3,752,872	-				-0.8
3,752,881	+				+0.2
3,752,889	-				+1.9
3,752,923	+				-0.3
3,752,954	+				+0.1
3,752,961	+				-1.3
3,752,986	-				-0.9
3,753,001	-				+0.8
3,753,029	-		CCNA_03599	0.11	-0.6
3,753,046	-		CCNA_03599	0.13	-0.8
3,753,123	-		CCNA_03599	0.20	-1.4
3,753,124	+		CCNA_03599	0.21	+1.7
3,753,139	+		CCNA_03599	0.22	+0.8
3,753,153	+		CCNA_03599	0.23	+1.2
3,753,153	+		CCNA_03599	0.23	+0.8
3,753,161	-		CCNA_03599	0.24	-0.0
3,753,161	-		CCNA_03599	0.24	+1.1
3,753,221	+		CCNA_03599	0.30	+0.2
3,753,235	+		CCNA_03599	0.31	-0.4
3,753,276	+		CCNA_03599	0.35	-1.3
3,753,278	+		CCNA_03599	0.35	+1.8
3,753,278	+		CCNA_03599	0.35	+0.8
3,753,278	+				+2.2
3,753,278	+		CCNA_03599	0.35	-0.6
3,753,278	+		CCNA_03599	0.35	-1.9
3,753,278	+		CCNA_03599	0.35	-0.2
3,753,278	+				+2.8
3,753,284	-		CCNA_03599	0.36	+0.5
3,753,286	-		CCNA_03599	0.36	+0.1
3,753,286	-				+0.8
3,753,288	+		CCNA_03599	0.36	-0.8
3,753,316	+		CCNA_03599	0.39	-2.1
3,753,351	-		CCNA_03599	0.42	+0.5
3,753,358	-		CCNA_03599	0.43	-0.9
3,753,368	+		CCNA_03599	0.44	-0.4
3,753,368	+		CCNA_03599	0.44	-0.7
3,753,368	+		CCNA_03599	0.44	+0.0
3,753,393	-		CCNA_03599	0.46	-0.2
3,753,426	+		CCNA_03599	0.49	+1.4
3,753,429	+		CCNA_03599	0.50	+2.2
3,753,446	-		CCNA_03599	0.51	+1.8
3,753,478	-				+2.8
3,753,478	-		CCNA_03599	0.54	+0.4
3,753,478	-		CCNA_03599	0.54	-0.1
3,753,480	+		CCNA_03599	0.55	-0.1
3,753,501	+		CCNA_03599	0.57	+0.2
3,753,528	-		CCNA_03599	0.59	+0.1
3,753,531	-		CCNA_03599	0.59	-2.1
3,753,541	+		CCNA_03599	0.60	-0.4
3,753,549	-		CCNA_03599	0.61	-0.4
3,753,557	+		CCNA_03599	0.62	+0.5
3,753,564	+		CCNA_03599	0.63	-0.4
3,753,570	-		CCNA_03599	0.63	-2.1
3,753,585	+		CCNA_03599	0.65	+0.1
3,753,600	+		CCNA_03599	0.66	+0.3
3,753,600	+		CCNA_03599	0.66	-1.0